Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14122 | 42589;42590;42591 | chr2:178634417;178634416;178634415 | chr2:179499144;179499143;179499142 |
N2AB | 12481 | 37666;37667;37668 | chr2:178634417;178634416;178634415 | chr2:179499144;179499143;179499142 |
N2A | 11554 | 34885;34886;34887 | chr2:178634417;178634416;178634415 | chr2:179499144;179499143;179499142 |
N2B | 5057 | 15394;15395;15396 | chr2:178634417;178634416;178634415 | chr2:179499144;179499143;179499142 |
Novex-1 | 5182 | 15769;15770;15771 | chr2:178634417;178634416;178634415 | chr2:179499144;179499143;179499142 |
Novex-2 | 5249 | 15970;15971;15972 | chr2:178634417;178634416;178634415 | chr2:179499144;179499143;179499142 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs756627487 | -1.239 | 1.0 | D | 0.877 | 0.707 | None | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
Y/C | rs756627487 | -1.239 | 1.0 | D | 0.877 | 0.707 | None | gnomAD-4.0.0 | 6.16064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19766E-06 | 1.1598E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9968 | likely_pathogenic | 0.9961 | pathogenic | -1.845 | Destabilizing | 0.998 | D | 0.837 | deleterious | None | None | None | None | N |
Y/C | 0.9422 | likely_pathogenic | 0.9265 | pathogenic | -1.356 | Destabilizing | 1.0 | D | 0.877 | deleterious | D | 0.789211171 | None | None | N |
Y/D | 0.9988 | likely_pathogenic | 0.9977 | pathogenic | -2.537 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.789211171 | None | None | N |
Y/E | 0.9992 | likely_pathogenic | 0.9988 | pathogenic | -2.285 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Y/F | 0.251 | likely_benign | 0.2537 | benign | -0.564 | Destabilizing | 0.434 | N | 0.414 | neutral | D | 0.643718253 | None | None | N |
Y/G | 0.995 | likely_pathogenic | 0.9942 | pathogenic | -2.294 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
Y/H | 0.9868 | likely_pathogenic | 0.9795 | pathogenic | -1.949 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | D | 0.789832162 | None | None | N |
Y/I | 0.8863 | likely_pathogenic | 0.9238 | pathogenic | -0.37 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
Y/K | 0.999 | likely_pathogenic | 0.9984 | pathogenic | -1.634 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Y/L | 0.8245 | likely_pathogenic | 0.8716 | pathogenic | -0.37 | Destabilizing | 0.994 | D | 0.757 | deleterious | None | None | None | None | N |
Y/M | 0.9753 | likely_pathogenic | 0.9777 | pathogenic | -0.546 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
Y/N | 0.9929 | likely_pathogenic | 0.989 | pathogenic | -2.554 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.789211171 | None | None | N |
Y/P | 0.9986 | likely_pathogenic | 0.9983 | pathogenic | -0.876 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
Y/Q | 0.9991 | likely_pathogenic | 0.9985 | pathogenic | -2.032 | Highly Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
Y/R | 0.9955 | likely_pathogenic | 0.9937 | pathogenic | -2.104 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
Y/S | 0.9945 | likely_pathogenic | 0.9918 | pathogenic | -2.83 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | D | 0.789211171 | None | None | N |
Y/T | 0.9968 | likely_pathogenic | 0.9957 | pathogenic | -2.425 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Y/V | 0.8797 | likely_pathogenic | 0.8941 | pathogenic | -0.876 | Destabilizing | 0.997 | D | 0.786 | deleterious | None | None | None | None | N |
Y/W | 0.8762 | likely_pathogenic | 0.886 | pathogenic | -0.009 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.