Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14124 | 42595;42596;42597 | chr2:178634411;178634410;178634409 | chr2:179499138;179499137;179499136 |
N2AB | 12483 | 37672;37673;37674 | chr2:178634411;178634410;178634409 | chr2:179499138;179499137;179499136 |
N2A | 11556 | 34891;34892;34893 | chr2:178634411;178634410;178634409 | chr2:179499138;179499137;179499136 |
N2B | 5059 | 15400;15401;15402 | chr2:178634411;178634410;178634409 | chr2:179499138;179499137;179499136 |
Novex-1 | 5184 | 15775;15776;15777 | chr2:178634411;178634410;178634409 | chr2:179499138;179499137;179499136 |
Novex-2 | 5251 | 15976;15977;15978 | chr2:178634411;178634410;178634409 | chr2:179499138;179499137;179499136 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs753046446 | -1.332 | 0.959 | N | 0.678 | 0.297 | 0.216624796971 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.96E-06 | 0 |
A/S | rs753046446 | -1.332 | 0.959 | N | 0.678 | 0.297 | 0.216624796971 | gnomAD-4.0.0 | 3.19122E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72426E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6853 | likely_pathogenic | 0.6033 | pathogenic | -0.909 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
A/D | 0.9973 | likely_pathogenic | 0.9939 | pathogenic | -1.967 | Destabilizing | 0.996 | D | 0.856 | deleterious | N | 0.465225829 | None | None | N |
A/E | 0.9919 | likely_pathogenic | 0.9835 | pathogenic | -1.728 | Destabilizing | 0.997 | D | 0.792 | deleterious | None | None | None | None | N |
A/F | 0.9677 | likely_pathogenic | 0.9452 | pathogenic | -0.424 | Destabilizing | 0.991 | D | 0.856 | deleterious | None | None | None | None | N |
A/G | 0.4948 | ambiguous | 0.4694 | ambiguous | -1.337 | Destabilizing | 0.986 | D | 0.688 | prob.neutral | N | 0.465225829 | None | None | N |
A/H | 0.9972 | likely_pathogenic | 0.9934 | pathogenic | -1.887 | Destabilizing | 0.999 | D | 0.863 | deleterious | None | None | None | None | N |
A/I | 0.7393 | likely_pathogenic | 0.6537 | pathogenic | 0.636 | Stabilizing | 0.079 | N | 0.573 | neutral | None | None | None | None | N |
A/K | 0.9982 | likely_pathogenic | 0.9962 | pathogenic | -0.749 | Destabilizing | 0.997 | D | 0.79 | deleterious | None | None | None | None | N |
A/L | 0.6365 | likely_pathogenic | 0.5843 | pathogenic | 0.636 | Stabilizing | 0.759 | D | 0.616 | neutral | None | None | None | None | N |
A/M | 0.788 | likely_pathogenic | 0.699 | pathogenic | 0.228 | Stabilizing | 0.991 | D | 0.803 | deleterious | None | None | None | None | N |
A/N | 0.9902 | likely_pathogenic | 0.9784 | pathogenic | -1.145 | Destabilizing | 0.997 | D | 0.867 | deleterious | None | None | None | None | N |
A/P | 0.9939 | likely_pathogenic | 0.9922 | pathogenic | 0.2 | Stabilizing | 0.996 | D | 0.804 | deleterious | N | 0.465225829 | None | None | N |
A/Q | 0.9863 | likely_pathogenic | 0.9772 | pathogenic | -0.857 | Destabilizing | 0.997 | D | 0.8 | deleterious | None | None | None | None | N |
A/R | 0.9926 | likely_pathogenic | 0.9884 | pathogenic | -1.075 | Destabilizing | 0.997 | D | 0.804 | deleterious | None | None | None | None | N |
A/S | 0.5253 | ambiguous | 0.4084 | ambiguous | -1.595 | Destabilizing | 0.959 | D | 0.678 | prob.neutral | N | 0.465225829 | None | None | N |
A/T | 0.5248 | ambiguous | 0.3704 | ambiguous | -1.208 | Destabilizing | 0.92 | D | 0.687 | prob.neutral | N | 0.463906865 | None | None | N |
A/V | 0.3929 | ambiguous | 0.3232 | benign | 0.2 | Stabilizing | 0.134 | N | 0.45 | neutral | N | 0.402051211 | None | None | N |
A/W | 0.9984 | likely_pathogenic | 0.9969 | pathogenic | -1.25 | Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | N |
A/Y | 0.993 | likely_pathogenic | 0.9848 | pathogenic | -0.624 | Destabilizing | 0.997 | D | 0.867 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.