Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14127 | 42604;42605;42606 | chr2:178634402;178634401;178634400 | chr2:179499129;179499128;179499127 |
N2AB | 12486 | 37681;37682;37683 | chr2:178634402;178634401;178634400 | chr2:179499129;179499128;179499127 |
N2A | 11559 | 34900;34901;34902 | chr2:178634402;178634401;178634400 | chr2:179499129;179499128;179499127 |
N2B | 5062 | 15409;15410;15411 | chr2:178634402;178634401;178634400 | chr2:179499129;179499128;179499127 |
Novex-1 | 5187 | 15784;15785;15786 | chr2:178634402;178634401;178634400 | chr2:179499129;179499128;179499127 |
Novex-2 | 5254 | 15985;15986;15987 | chr2:178634402;178634401;178634400 | chr2:179499129;179499128;179499127 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs750100548 | -0.045 | 0.001 | N | 0.193 | 0.029 | 0.0297737177859 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.66E-05 | None | 0 | None | 0 | 0 | 0 |
E/D | rs750100548 | -0.045 | 0.001 | N | 0.193 | 0.029 | 0.0297737177859 | gnomAD-4.0.0 | 1.37107E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.53024E-05 | None | 0 | 0 | 9.00051E-07 | 0 | 0 |
E/Q | None | None | 0.324 | N | 0.46 | 0.15 | 0.132336055621 | gnomAD-4.0.0 | 1.59794E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.42365E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2023 | likely_benign | 0.2157 | benign | -0.04 | Destabilizing | 0.165 | N | 0.464 | neutral | N | 0.448825863 | None | None | N |
E/C | 0.8344 | likely_pathogenic | 0.8857 | pathogenic | -0.253 | Destabilizing | 0.981 | D | 0.565 | neutral | None | None | None | None | N |
E/D | 0.0972 | likely_benign | 0.114 | benign | -0.35 | Destabilizing | 0.001 | N | 0.193 | neutral | N | 0.442507023 | None | None | N |
E/F | 0.8309 | likely_pathogenic | 0.8693 | pathogenic | 0.073 | Stabilizing | 0.69 | D | 0.555 | neutral | None | None | None | None | N |
E/G | 0.1821 | likely_benign | 0.2074 | benign | -0.194 | Destabilizing | 0.324 | N | 0.533 | neutral | N | 0.378764009 | None | None | N |
E/H | 0.6244 | likely_pathogenic | 0.6802 | pathogenic | 0.687 | Stabilizing | 0.818 | D | 0.442 | neutral | None | None | None | None | N |
E/I | 0.6331 | likely_pathogenic | 0.6842 | pathogenic | 0.318 | Stabilizing | 0.241 | N | 0.561 | neutral | None | None | None | None | N |
E/K | 0.3313 | likely_benign | 0.3558 | ambiguous | 0.452 | Stabilizing | 0.324 | N | 0.435 | neutral | N | 0.434449863 | None | None | N |
E/L | 0.5489 | ambiguous | 0.5855 | pathogenic | 0.318 | Stabilizing | 0.001 | N | 0.345 | neutral | None | None | None | None | N |
E/M | 0.6251 | likely_pathogenic | 0.6627 | pathogenic | 0.036 | Stabilizing | 0.69 | D | 0.533 | neutral | None | None | None | None | N |
E/N | 0.2601 | likely_benign | 0.3163 | benign | 0.029 | Stabilizing | 0.241 | N | 0.443 | neutral | None | None | None | None | N |
E/P | 0.7698 | likely_pathogenic | 0.8095 | pathogenic | 0.218 | Stabilizing | 0.818 | D | 0.491 | neutral | None | None | None | None | N |
E/Q | 0.2468 | likely_benign | 0.2642 | benign | 0.074 | Stabilizing | 0.324 | N | 0.46 | neutral | N | 0.444788607 | None | None | N |
E/R | 0.4382 | ambiguous | 0.476 | ambiguous | 0.762 | Stabilizing | 0.69 | D | 0.441 | neutral | None | None | None | None | N |
E/S | 0.2531 | likely_benign | 0.2894 | benign | -0.081 | Destabilizing | 0.241 | N | 0.407 | neutral | None | None | None | None | N |
E/T | 0.4603 | ambiguous | 0.5029 | ambiguous | 0.059 | Stabilizing | 0.388 | N | 0.499 | neutral | None | None | None | None | N |
E/V | 0.4422 | ambiguous | 0.4939 | ambiguous | 0.218 | Stabilizing | 0.193 | N | 0.535 | neutral | N | 0.451648247 | None | None | N |
E/W | 0.9303 | likely_pathogenic | 0.9471 | pathogenic | 0.17 | Stabilizing | 0.981 | D | 0.639 | neutral | None | None | None | None | N |
E/Y | 0.6709 | likely_pathogenic | 0.7341 | pathogenic | 0.314 | Stabilizing | 0.932 | D | 0.533 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.