Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14130 | 42613;42614;42615 | chr2:178634393;178634392;178634391 | chr2:179499120;179499119;179499118 |
N2AB | 12489 | 37690;37691;37692 | chr2:178634393;178634392;178634391 | chr2:179499120;179499119;179499118 |
N2A | 11562 | 34909;34910;34911 | chr2:178634393;178634392;178634391 | chr2:179499120;179499119;179499118 |
N2B | 5065 | 15418;15419;15420 | chr2:178634393;178634392;178634391 | chr2:179499120;179499119;179499118 |
Novex-1 | 5190 | 15793;15794;15795 | chr2:178634393;178634392;178634391 | chr2:179499120;179499119;179499118 |
Novex-2 | 5257 | 15994;15995;15996 | chr2:178634393;178634392;178634391 | chr2:179499120;179499119;179499118 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.92 | N | 0.519 | 0.153 | 0.139678290688 | gnomAD-4.0.0 | 2.40078E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31258E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3606 | ambiguous | 0.427 | ambiguous | -0.231 | Destabilizing | 0.759 | D | 0.385 | neutral | None | None | None | None | N |
K/C | 0.7225 | likely_pathogenic | 0.7567 | pathogenic | -0.365 | Destabilizing | 0.999 | D | 0.504 | neutral | None | None | None | None | N |
K/D | 0.6601 | likely_pathogenic | 0.726 | pathogenic | 0.326 | Stabilizing | 0.884 | D | 0.58 | neutral | None | None | None | None | N |
K/E | 0.1645 | likely_benign | 0.2093 | benign | 0.363 | Stabilizing | 0.134 | N | 0.174 | neutral | N | 0.440884478 | None | None | N |
K/F | 0.7983 | likely_pathogenic | 0.8435 | pathogenic | -0.301 | Destabilizing | 0.991 | D | 0.545 | neutral | None | None | None | None | N |
K/G | 0.5232 | ambiguous | 0.6335 | pathogenic | -0.48 | Destabilizing | 0.939 | D | 0.567 | neutral | None | None | None | None | N |
K/H | 0.3636 | ambiguous | 0.3861 | ambiguous | -0.758 | Destabilizing | 0.997 | D | 0.554 | neutral | None | None | None | None | N |
K/I | 0.3339 | likely_benign | 0.3788 | ambiguous | 0.36 | Stabilizing | 0.884 | D | 0.571 | neutral | None | None | None | None | N |
K/L | 0.4121 | ambiguous | 0.4657 | ambiguous | 0.36 | Stabilizing | 0.759 | D | 0.499 | neutral | None | None | None | None | N |
K/M | 0.2112 | likely_benign | 0.2283 | benign | 0.2 | Stabilizing | 0.509 | D | 0.295 | neutral | N | 0.438149757 | None | None | N |
K/N | 0.3926 | ambiguous | 0.4496 | ambiguous | 0.109 | Stabilizing | 0.92 | D | 0.519 | neutral | N | 0.447022625 | None | None | N |
K/P | 0.8503 | likely_pathogenic | 0.9099 | pathogenic | 0.193 | Stabilizing | 0.969 | D | 0.588 | neutral | None | None | None | None | N |
K/Q | 0.1215 | likely_benign | 0.1334 | benign | -0.059 | Destabilizing | 0.92 | D | 0.551 | neutral | N | 0.453119563 | None | None | N |
K/R | 0.0943 | likely_benign | 0.1048 | benign | -0.115 | Destabilizing | 0.92 | D | 0.515 | neutral | N | 0.443671065 | None | None | N |
K/S | 0.3821 | ambiguous | 0.4522 | ambiguous | -0.53 | Destabilizing | 0.373 | N | 0.164 | neutral | None | None | None | None | N |
K/T | 0.1315 | likely_benign | 0.1464 | benign | -0.319 | Destabilizing | 0.061 | N | 0.233 | neutral | N | 0.426921516 | None | None | N |
K/V | 0.3057 | likely_benign | 0.359 | ambiguous | 0.193 | Stabilizing | 0.884 | D | 0.571 | neutral | None | None | None | None | N |
K/W | 0.827 | likely_pathogenic | 0.8603 | pathogenic | -0.218 | Destabilizing | 0.999 | D | 0.511 | neutral | None | None | None | None | N |
K/Y | 0.6758 | likely_pathogenic | 0.719 | pathogenic | 0.115 | Stabilizing | 0.997 | D | 0.541 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.