Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14131 | 42616;42617;42618 | chr2:178634390;178634389;178634388 | chr2:179499117;179499116;179499115 |
N2AB | 12490 | 37693;37694;37695 | chr2:178634390;178634389;178634388 | chr2:179499117;179499116;179499115 |
N2A | 11563 | 34912;34913;34914 | chr2:178634390;178634389;178634388 | chr2:179499117;179499116;179499115 |
N2B | 5066 | 15421;15422;15423 | chr2:178634390;178634389;178634388 | chr2:179499117;179499116;179499115 |
Novex-1 | 5191 | 15796;15797;15798 | chr2:178634390;178634389;178634388 | chr2:179499117;179499116;179499115 |
Novex-2 | 5258 | 15997;15998;15999 | chr2:178634390;178634389;178634388 | chr2:179499117;179499116;179499115 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 0.062 | D | 0.63 | 0.224 | 0.18995819373 | gnomAD-4.0.0 | 6.86343E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00343E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1234 | likely_benign | 0.2847 | benign | -1.054 | Destabilizing | 0.001 | N | 0.289 | neutral | N | 0.44375616 | None | None | N |
T/C | 0.5116 | ambiguous | 0.7513 | pathogenic | -0.535 | Destabilizing | 0.555 | D | 0.627 | neutral | None | None | None | None | N |
T/D | 0.7672 | likely_pathogenic | 0.8969 | pathogenic | -0.345 | Destabilizing | 0.081 | N | 0.621 | neutral | None | None | None | None | N |
T/E | 0.7546 | likely_pathogenic | 0.908 | pathogenic | -0.255 | Destabilizing | 0.081 | N | 0.627 | neutral | None | None | None | None | N |
T/F | 0.6887 | likely_pathogenic | 0.8948 | pathogenic | -0.81 | Destabilizing | 0.555 | D | 0.637 | neutral | None | None | None | None | N |
T/G | 0.4074 | ambiguous | 0.595 | pathogenic | -1.41 | Destabilizing | 0.035 | N | 0.589 | neutral | None | None | None | None | N |
T/H | 0.6742 | likely_pathogenic | 0.8448 | pathogenic | -1.486 | Destabilizing | 0.555 | D | 0.612 | neutral | None | None | None | None | N |
T/I | 0.5471 | ambiguous | 0.8326 | pathogenic | -0.163 | Destabilizing | 0.117 | N | 0.617 | neutral | D | 0.58645716 | None | None | N |
T/K | 0.8037 | likely_pathogenic | 0.9409 | pathogenic | -0.646 | Destabilizing | 0.081 | N | 0.627 | neutral | None | None | None | None | N |
T/L | 0.3494 | ambiguous | 0.6269 | pathogenic | -0.163 | Destabilizing | 0.067 | N | 0.607 | neutral | None | None | None | None | N |
T/M | 0.2303 | likely_benign | 0.4363 | ambiguous | 0.029 | Stabilizing | 0.791 | D | 0.634 | neutral | None | None | None | None | N |
T/N | 0.3181 | likely_benign | 0.4824 | ambiguous | -0.833 | Destabilizing | 0.062 | N | 0.63 | neutral | D | 0.587793178 | None | None | N |
T/P | 0.8512 | likely_pathogenic | 0.9293 | pathogenic | -0.427 | Destabilizing | 0.117 | N | 0.617 | neutral | D | 0.58929604 | None | None | N |
T/Q | 0.6614 | likely_pathogenic | 0.8662 | pathogenic | -0.816 | Destabilizing | 0.38 | N | 0.661 | neutral | None | None | None | None | N |
T/R | 0.7465 | likely_pathogenic | 0.9232 | pathogenic | -0.572 | Destabilizing | 0.149 | N | 0.64 | neutral | None | None | None | None | N |
T/S | 0.1178 | likely_benign | 0.1425 | benign | -1.194 | Destabilizing | None | N | 0.273 | neutral | N | 0.412354981 | None | None | N |
T/V | 0.3732 | ambiguous | 0.6647 | pathogenic | -0.427 | Destabilizing | 0.067 | N | 0.609 | neutral | None | None | None | None | N |
T/W | 0.9327 | likely_pathogenic | 0.9827 | pathogenic | -0.772 | Destabilizing | 0.935 | D | 0.63 | neutral | None | None | None | None | N |
T/Y | 0.6359 | likely_pathogenic | 0.864 | pathogenic | -0.519 | Destabilizing | 0.555 | D | 0.633 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.