Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14136 | 42631;42632;42633 | chr2:178634375;178634374;178634373 | chr2:179499102;179499101;179499100 |
N2AB | 12495 | 37708;37709;37710 | chr2:178634375;178634374;178634373 | chr2:179499102;179499101;179499100 |
N2A | 11568 | 34927;34928;34929 | chr2:178634375;178634374;178634373 | chr2:179499102;179499101;179499100 |
N2B | 5071 | 15436;15437;15438 | chr2:178634375;178634374;178634373 | chr2:179499102;179499101;179499100 |
Novex-1 | 5196 | 15811;15812;15813 | chr2:178634375;178634374;178634373 | chr2:179499102;179499101;179499100 |
Novex-2 | 5263 | 16012;16013;16014 | chr2:178634375;178634374;178634373 | chr2:179499102;179499101;179499100 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | None | None | 0.473 | N | 0.349 | 0.154 | 0.583333579207 | gnomAD-4.0.0 | 1.61712E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87712E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.3974 | ambiguous | 0.4989 | ambiguous | -2.092 | Highly Destabilizing | 0.329 | N | 0.286 | neutral | None | None | None | None | N |
F/C | 0.4237 | ambiguous | 0.4694 | ambiguous | -0.771 | Destabilizing | 0.993 | D | 0.34 | neutral | N | 0.444392523 | None | None | N |
F/D | 0.6486 | likely_pathogenic | 0.7374 | pathogenic | -0.664 | Destabilizing | 0.704 | D | 0.42 | neutral | None | None | None | None | N |
F/E | 0.6137 | likely_pathogenic | 0.7098 | pathogenic | -0.621 | Destabilizing | 0.704 | D | 0.381 | neutral | None | None | None | None | N |
F/G | 0.784 | likely_pathogenic | 0.8446 | pathogenic | -2.393 | Highly Destabilizing | 0.704 | D | 0.361 | neutral | None | None | None | None | N |
F/H | 0.3611 | ambiguous | 0.4266 | ambiguous | -0.665 | Destabilizing | 0.893 | D | 0.354 | neutral | None | None | None | None | N |
F/I | 0.1711 | likely_benign | 0.2201 | benign | -1.208 | Destabilizing | 0.023 | N | 0.117 | neutral | N | 0.417274599 | None | None | N |
F/K | 0.6636 | likely_pathogenic | 0.7603 | pathogenic | -0.864 | Destabilizing | 0.543 | D | 0.363 | neutral | None | None | None | None | N |
F/L | 0.7279 | likely_pathogenic | 0.8074 | pathogenic | -1.208 | Destabilizing | 0.139 | N | 0.185 | neutral | N | 0.445968425 | None | None | N |
F/M | 0.4197 | ambiguous | 0.5086 | ambiguous | -0.801 | Destabilizing | 0.944 | D | 0.351 | neutral | None | None | None | None | N |
F/N | 0.4069 | ambiguous | 0.501 | ambiguous | -0.771 | Destabilizing | 0.704 | D | 0.436 | neutral | None | None | None | None | N |
F/P | 0.9946 | likely_pathogenic | 0.9956 | pathogenic | -1.493 | Destabilizing | 0.944 | D | 0.401 | neutral | None | None | None | None | N |
F/Q | 0.5479 | ambiguous | 0.6597 | pathogenic | -0.935 | Destabilizing | 0.893 | D | 0.419 | neutral | None | None | None | None | N |
F/R | 0.5695 | likely_pathogenic | 0.6662 | pathogenic | -0.139 | Destabilizing | 0.007 | N | 0.318 | neutral | None | None | None | None | N |
F/S | 0.2321 | likely_benign | 0.3103 | benign | -1.558 | Destabilizing | 0.473 | N | 0.349 | neutral | N | 0.443725082 | None | None | N |
F/T | 0.2049 | likely_benign | 0.2738 | benign | -1.428 | Destabilizing | 0.013 | N | 0.203 | neutral | None | None | None | None | N |
F/V | 0.1753 | likely_benign | 0.2245 | benign | -1.493 | Destabilizing | 0.27 | N | 0.288 | neutral | N | 0.423245803 | None | None | N |
F/W | 0.553 | ambiguous | 0.6165 | pathogenic | -0.53 | Destabilizing | 0.985 | D | 0.368 | neutral | None | None | None | None | N |
F/Y | 0.1659 | likely_benign | 0.1808 | benign | -0.67 | Destabilizing | 0.006 | N | 0.151 | neutral | N | 0.445332092 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.