Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14137 | 42634;42635;42636 | chr2:178634372;178634371;178634370 | chr2:179499099;179499098;179499097 |
N2AB | 12496 | 37711;37712;37713 | chr2:178634372;178634371;178634370 | chr2:179499099;179499098;179499097 |
N2A | 11569 | 34930;34931;34932 | chr2:178634372;178634371;178634370 | chr2:179499099;179499098;179499097 |
N2B | 5072 | 15439;15440;15441 | chr2:178634372;178634371;178634370 | chr2:179499099;179499098;179499097 |
Novex-1 | 5197 | 15814;15815;15816 | chr2:178634372;178634371;178634370 | chr2:179499099;179499098;179499097 |
Novex-2 | 5264 | 16015;16016;16017 | chr2:178634372;178634371;178634370 | chr2:179499099;179499098;179499097 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.76 | D | 0.559 | 0.506 | 0.648165742856 | gnomAD-4.0.0 | 1.61779E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.48447E-05 | 0 |
V/I | rs1168812566 | None | 0.99 | D | 0.527 | 0.401 | 0.602001837285 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/I | rs1168812566 | None | 0.99 | D | 0.527 | 0.401 | 0.602001837285 | gnomAD-4.0.0 | 1.87117E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54797E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.953 | likely_pathogenic | 0.9362 | pathogenic | -2.083 | Highly Destabilizing | 0.76 | D | 0.559 | neutral | D | 0.73787695 | None | None | N |
V/C | 0.9848 | likely_pathogenic | 0.9807 | pathogenic | -1.802 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
V/D | 0.9978 | likely_pathogenic | 0.9966 | pathogenic | -2.71 | Highly Destabilizing | 0.982 | D | 0.702 | prob.neutral | D | 0.740077845 | None | None | N |
V/E | 0.9929 | likely_pathogenic | 0.9907 | pathogenic | -2.564 | Highly Destabilizing | 0.993 | D | 0.667 | neutral | None | None | None | None | N |
V/F | 0.9539 | likely_pathogenic | 0.9407 | pathogenic | -1.239 | Destabilizing | 0.997 | D | 0.669 | neutral | D | 0.739382208 | None | None | N |
V/G | 0.9669 | likely_pathogenic | 0.9599 | pathogenic | -2.511 | Highly Destabilizing | 0.046 | N | 0.495 | neutral | D | 0.740077845 | None | None | N |
V/H | 0.9973 | likely_pathogenic | 0.9965 | pathogenic | -2.031 | Highly Destabilizing | 0.999 | D | 0.688 | prob.neutral | None | None | None | None | N |
V/I | 0.1734 | likely_benign | 0.1635 | benign | -0.916 | Destabilizing | 0.99 | D | 0.527 | neutral | D | 0.575489922 | None | None | N |
V/K | 0.9915 | likely_pathogenic | 0.9894 | pathogenic | -1.584 | Destabilizing | 0.986 | D | 0.675 | neutral | None | None | None | None | N |
V/L | 0.8415 | likely_pathogenic | 0.8329 | pathogenic | -0.916 | Destabilizing | 0.928 | D | 0.548 | neutral | D | 0.735733875 | None | None | N |
V/M | 0.9147 | likely_pathogenic | 0.8835 | pathogenic | -1.144 | Destabilizing | 0.998 | D | 0.679 | prob.neutral | None | None | None | None | N |
V/N | 0.99 | likely_pathogenic | 0.9857 | pathogenic | -1.774 | Destabilizing | 0.986 | D | 0.697 | prob.neutral | None | None | None | None | N |
V/P | 0.9937 | likely_pathogenic | 0.9865 | pathogenic | -1.279 | Destabilizing | 0.998 | D | 0.667 | neutral | None | None | None | None | N |
V/Q | 0.9907 | likely_pathogenic | 0.9875 | pathogenic | -1.764 | Destabilizing | 0.998 | D | 0.681 | prob.neutral | None | None | None | None | N |
V/R | 0.9833 | likely_pathogenic | 0.9796 | pathogenic | -1.295 | Destabilizing | 0.993 | D | 0.704 | prob.neutral | None | None | None | None | N |
V/S | 0.9737 | likely_pathogenic | 0.9638 | pathogenic | -2.326 | Highly Destabilizing | 0.986 | D | 0.645 | neutral | None | None | None | None | N |
V/T | 0.9316 | likely_pathogenic | 0.9166 | pathogenic | -2.064 | Highly Destabilizing | 0.976 | D | 0.617 | neutral | None | None | None | None | N |
V/W | 0.9995 | likely_pathogenic | 0.9993 | pathogenic | -1.6 | Destabilizing | 0.999 | D | 0.676 | prob.neutral | None | None | None | None | N |
V/Y | 0.9963 | likely_pathogenic | 0.9953 | pathogenic | -1.303 | Destabilizing | 0.998 | D | 0.682 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.