Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14138 | 42637;42638;42639 | chr2:178634369;178634368;178634367 | chr2:179499096;179499095;179499094 |
N2AB | 12497 | 37714;37715;37716 | chr2:178634369;178634368;178634367 | chr2:179499096;179499095;179499094 |
N2A | 11570 | 34933;34934;34935 | chr2:178634369;178634368;178634367 | chr2:179499096;179499095;179499094 |
N2B | 5073 | 15442;15443;15444 | chr2:178634369;178634368;178634367 | chr2:179499096;179499095;179499094 |
Novex-1 | 5198 | 15817;15818;15819 | chr2:178634369;178634368;178634367 | chr2:179499096;179499095;179499094 |
Novex-2 | 5265 | 16018;16019;16020 | chr2:178634369;178634368;178634367 | chr2:179499096;179499095;179499094 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.044 | N | 0.256 | 0.099 | 0.104622674875 | gnomAD-4.0.0 | 6.89099E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.01369E-07 | 0 | 0 |
T/P | rs376500376 | -0.063 | 0.31 | N | 0.394 | 0.234 | None | gnomAD-2.1.1 | 1.48E-05 | None | None | None | None | I | None | 1.67462E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/P | rs376500376 | -0.063 | 0.31 | N | 0.394 | 0.234 | None | gnomAD-3.1.2 | 3.94E-05 | None | None | None | None | I | None | 1.44788E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/P | rs376500376 | -0.063 | 0.31 | N | 0.394 | 0.234 | None | gnomAD-4.0.0 | 5.61355E-06 | None | None | None | None | I | None | 1.21737E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.108 | likely_benign | 0.1195 | benign | -0.457 | Destabilizing | 0.044 | N | 0.256 | neutral | N | 0.447011688 | None | None | I |
T/C | 0.6838 | likely_pathogenic | 0.6844 | pathogenic | -0.374 | Destabilizing | 0.96 | D | 0.306 | neutral | None | None | None | None | I |
T/D | 0.3477 | ambiguous | 0.4288 | ambiguous | 0.423 | Stabilizing | 0.057 | N | 0.289 | neutral | None | None | None | None | I |
T/E | 0.1285 | likely_benign | 0.1836 | benign | 0.395 | Stabilizing | None | N | 0.126 | neutral | None | None | None | None | I |
T/F | 0.5437 | ambiguous | 0.5739 | pathogenic | -0.744 | Destabilizing | 0.864 | D | 0.339 | neutral | None | None | None | None | I |
T/G | 0.3135 | likely_benign | 0.3862 | ambiguous | -0.652 | Destabilizing | 0.227 | N | 0.318 | neutral | None | None | None | None | I |
T/H | 0.3507 | ambiguous | 0.3684 | ambiguous | -0.848 | Destabilizing | 0.676 | D | 0.319 | neutral | None | None | None | None | I |
T/I | 0.3428 | ambiguous | 0.3648 | ambiguous | -0.051 | Destabilizing | 0.612 | D | 0.375 | neutral | N | 0.441182261 | None | None | I |
T/K | 0.1691 | likely_benign | 0.1992 | benign | -0.355 | Destabilizing | 0.044 | N | 0.316 | neutral | N | 0.395847323 | None | None | I |
T/L | 0.1867 | likely_benign | 0.2072 | benign | -0.051 | Destabilizing | 0.227 | N | 0.311 | neutral | None | None | None | None | I |
T/M | 0.1505 | likely_benign | 0.145 | benign | -0.058 | Destabilizing | 0.864 | D | 0.285 | neutral | None | None | None | None | I |
T/N | 0.1524 | likely_benign | 0.1699 | benign | -0.264 | Destabilizing | 0.227 | N | 0.239 | neutral | None | None | None | None | I |
T/P | 0.4134 | ambiguous | 0.4008 | ambiguous | -0.155 | Destabilizing | 0.31 | N | 0.394 | neutral | N | 0.454289891 | None | None | I |
T/Q | 0.1774 | likely_benign | 0.2155 | benign | -0.386 | Destabilizing | 0.128 | N | 0.328 | neutral | None | None | None | None | I |
T/R | 0.2007 | likely_benign | 0.2141 | benign | -0.149 | Destabilizing | 0.181 | N | 0.346 | neutral | N | 0.417707486 | None | None | I |
T/S | 0.1357 | likely_benign | 0.1515 | benign | -0.542 | Destabilizing | 0.044 | N | 0.301 | neutral | N | 0.448995558 | None | None | I |
T/V | 0.2338 | likely_benign | 0.2496 | benign | -0.155 | Destabilizing | 0.227 | N | 0.235 | neutral | None | None | None | None | I |
T/W | 0.7862 | likely_pathogenic | 0.7909 | pathogenic | -0.74 | Destabilizing | 0.96 | D | 0.343 | neutral | None | None | None | None | I |
T/Y | 0.4846 | ambiguous | 0.5067 | ambiguous | -0.457 | Destabilizing | 0.864 | D | 0.344 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.