Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14149 | 42670;42671;42672 | chr2:178634054;178634053;178634052 | chr2:179498781;179498780;179498779 |
N2AB | 12508 | 37747;37748;37749 | chr2:178634054;178634053;178634052 | chr2:179498781;179498780;179498779 |
N2A | 11581 | 34966;34967;34968 | chr2:178634054;178634053;178634052 | chr2:179498781;179498780;179498779 |
N2B | 5084 | 15475;15476;15477 | chr2:178634054;178634053;178634052 | chr2:179498781;179498780;179498779 |
Novex-1 | 5209 | 15850;15851;15852 | chr2:178634054;178634053;178634052 | chr2:179498781;179498780;179498779 |
Novex-2 | 5276 | 16051;16052;16053 | chr2:178634054;178634053;178634052 | chr2:179498781;179498780;179498779 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.002 | N | 0.129 | 0.233 | 0.247322355667 | gnomAD-4.0.0 | 1.36901E-06 | None | None | None | None | N | None | 2.99133E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99722E-07 | 0 | 0 |
E/Q | None | None | 0.01 | N | 0.135 | 0.097 | 0.286848849266 | gnomAD-4.0.0 | 6.84507E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99722E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1043 | likely_benign | 0.1182 | benign | -0.421 | Destabilizing | 0.139 | N | 0.213 | neutral | N | 0.475481044 | None | None | N |
E/C | 0.7041 | likely_pathogenic | 0.7573 | pathogenic | -0.263 | Destabilizing | 0.995 | D | 0.267 | neutral | None | None | None | None | N |
E/D | 0.1588 | likely_benign | 0.1796 | benign | -0.435 | Destabilizing | 0.425 | N | 0.221 | neutral | N | 0.502657247 | None | None | N |
E/F | 0.6319 | likely_pathogenic | 0.6937 | pathogenic | -0.115 | Destabilizing | 0.981 | D | 0.299 | neutral | None | None | None | None | N |
E/G | 0.1307 | likely_benign | 0.1405 | benign | -0.662 | Destabilizing | 0.002 | N | 0.19 | neutral | N | 0.50941196 | None | None | N |
E/H | 0.2909 | likely_benign | 0.3442 | ambiguous | 0.071 | Stabilizing | 0.944 | D | 0.331 | neutral | None | None | None | None | N |
E/I | 0.249 | likely_benign | 0.2806 | benign | 0.194 | Stabilizing | 0.893 | D | 0.365 | neutral | None | None | None | None | N |
E/K | 0.0734 | likely_benign | 0.0743 | benign | 0.023 | Stabilizing | 0.002 | N | 0.129 | neutral | N | 0.378770873 | None | None | N |
E/L | 0.2501 | likely_benign | 0.287 | benign | 0.194 | Stabilizing | 0.495 | N | 0.34 | neutral | None | None | None | None | N |
E/M | 0.3164 | likely_benign | 0.3519 | ambiguous | 0.196 | Stabilizing | 0.944 | D | 0.289 | neutral | None | None | None | None | N |
E/N | 0.2009 | likely_benign | 0.2184 | benign | -0.309 | Destabilizing | 0.495 | N | 0.259 | neutral | None | None | None | None | N |
E/P | 0.5366 | ambiguous | 0.6774 | pathogenic | 0.009 | Stabilizing | 0.828 | D | 0.325 | neutral | None | None | None | None | N |
E/Q | 0.0845 | likely_benign | 0.0947 | benign | -0.236 | Destabilizing | 0.01 | N | 0.135 | neutral | N | 0.402515489 | None | None | N |
E/R | 0.1286 | likely_benign | 0.1466 | benign | 0.335 | Stabilizing | 0.329 | N | 0.259 | neutral | None | None | None | None | N |
E/S | 0.1428 | likely_benign | 0.1591 | benign | -0.505 | Destabilizing | 0.037 | N | 0.169 | neutral | None | None | None | None | N |
E/T | 0.1379 | likely_benign | 0.1546 | benign | -0.309 | Destabilizing | 0.013 | N | 0.173 | neutral | None | None | None | None | N |
E/V | 0.1441 | likely_benign | 0.1613 | benign | 0.009 | Stabilizing | 0.642 | D | 0.339 | neutral | N | 0.508779038 | None | None | N |
E/W | 0.7972 | likely_pathogenic | 0.847 | pathogenic | 0.07 | Stabilizing | 0.995 | D | 0.273 | neutral | None | None | None | None | N |
E/Y | 0.5057 | ambiguous | 0.5839 | pathogenic | 0.125 | Stabilizing | 0.981 | D | 0.312 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.