Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14150 | 42673;42674;42675 | chr2:178634051;178634050;178634049 | chr2:179498778;179498777;179498776 |
N2AB | 12509 | 37750;37751;37752 | chr2:178634051;178634050;178634049 | chr2:179498778;179498777;179498776 |
N2A | 11582 | 34969;34970;34971 | chr2:178634051;178634050;178634049 | chr2:179498778;179498777;179498776 |
N2B | 5085 | 15478;15479;15480 | chr2:178634051;178634050;178634049 | chr2:179498778;179498777;179498776 |
Novex-1 | 5210 | 15853;15854;15855 | chr2:178634051;178634050;178634049 | chr2:179498778;179498777;179498776 |
Novex-2 | 5277 | 16054;16055;16056 | chr2:178634051;178634050;178634049 | chr2:179498778;179498777;179498776 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs1184338421 | -0.188 | 1.0 | N | 0.693 | 0.348 | 0.330331372229 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
D/N | rs1184338421 | -0.188 | 1.0 | N | 0.693 | 0.348 | 0.330331372229 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5614 | ambiguous | 0.5312 | ambiguous | -0.359 | Destabilizing | 1.0 | D | 0.816 | deleterious | N | 0.515486611 | None | None | N |
D/C | 0.9472 | likely_pathogenic | 0.935 | pathogenic | -0.098 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
D/E | 0.5359 | ambiguous | 0.5008 | ambiguous | -0.392 | Destabilizing | 1.0 | D | 0.477 | neutral | D | 0.64059904 | None | None | N |
D/F | 0.9537 | likely_pathogenic | 0.9455 | pathogenic | -0.147 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
D/G | 0.4808 | ambiguous | 0.4322 | ambiguous | -0.61 | Destabilizing | 1.0 | D | 0.8 | deleterious | D | 0.602299001 | None | None | N |
D/H | 0.7515 | likely_pathogenic | 0.7484 | pathogenic | -0.162 | Destabilizing | 1.0 | D | 0.791 | deleterious | D | 0.58376843 | None | None | N |
D/I | 0.8853 | likely_pathogenic | 0.8694 | pathogenic | 0.269 | Stabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
D/K | 0.845 | likely_pathogenic | 0.847 | pathogenic | 0.044 | Stabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
D/L | 0.8924 | likely_pathogenic | 0.8753 | pathogenic | 0.269 | Stabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
D/M | 0.9504 | likely_pathogenic | 0.9397 | pathogenic | 0.421 | Stabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
D/N | 0.1492 | likely_benign | 0.1574 | benign | -0.258 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.467930235 | None | None | N |
D/P | 0.7704 | likely_pathogenic | 0.8015 | pathogenic | 0.084 | Stabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
D/Q | 0.8499 | likely_pathogenic | 0.8467 | pathogenic | -0.199 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
D/R | 0.9057 | likely_pathogenic | 0.9018 | pathogenic | 0.251 | Stabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
D/S | 0.3291 | likely_benign | 0.3066 | benign | -0.414 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
D/T | 0.6993 | likely_pathogenic | 0.665 | pathogenic | -0.22 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
D/V | 0.7762 | likely_pathogenic | 0.7355 | pathogenic | 0.084 | Stabilizing | 1.0 | D | 0.857 | deleterious | D | 0.642804253 | None | None | N |
D/W | 0.9911 | likely_pathogenic | 0.9887 | pathogenic | 0.016 | Stabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
D/Y | 0.6962 | likely_pathogenic | 0.6717 | pathogenic | 0.091 | Stabilizing | 1.0 | D | 0.835 | deleterious | D | 0.58376843 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.