Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14157 | 42694;42695;42696 | chr2:178634030;178634029;178634028 | chr2:179498757;179498756;179498755 |
N2AB | 12516 | 37771;37772;37773 | chr2:178634030;178634029;178634028 | chr2:179498757;179498756;179498755 |
N2A | 11589 | 34990;34991;34992 | chr2:178634030;178634029;178634028 | chr2:179498757;179498756;179498755 |
N2B | 5092 | 15499;15500;15501 | chr2:178634030;178634029;178634028 | chr2:179498757;179498756;179498755 |
Novex-1 | 5217 | 15874;15875;15876 | chr2:178634030;178634029;178634028 | chr2:179498757;179498756;179498755 |
Novex-2 | 5284 | 16075;16076;16077 | chr2:178634030;178634029;178634028 | chr2:179498757;179498756;179498755 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | None | N | 0.256 | 0.1 | 0.219573609325 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 3.66327E-05 |
E/K | rs1207534553 | None | 0.001 | N | 0.155 | 0.105 | 0.0666544352282 | gnomAD-4.0.0 | 1.59247E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.027E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1598 | likely_benign | 0.1837 | benign | -0.572 | Destabilizing | 0.027 | N | 0.361 | neutral | N | 0.462991925 | None | None | N |
E/C | 0.829 | likely_pathogenic | 0.8608 | pathogenic | -0.135 | Destabilizing | 0.935 | D | 0.411 | neutral | None | None | None | None | N |
E/D | 0.1586 | likely_benign | 0.187 | benign | -0.595 | Destabilizing | 0.052 | N | 0.291 | neutral | N | 0.454004062 | None | None | N |
E/F | 0.7533 | likely_pathogenic | 0.796 | pathogenic | -0.335 | Destabilizing | 0.791 | D | 0.402 | neutral | None | None | None | None | N |
E/G | 0.1254 | likely_benign | 0.1687 | benign | -0.815 | Destabilizing | None | N | 0.256 | neutral | N | 0.457856484 | None | None | N |
E/H | 0.4891 | ambiguous | 0.5196 | ambiguous | -0.253 | Destabilizing | 0.38 | N | 0.34 | neutral | None | None | None | None | N |
E/I | 0.4715 | ambiguous | 0.5187 | ambiguous | 0.049 | Stabilizing | 0.38 | N | 0.417 | neutral | None | None | None | None | N |
E/K | 0.1267 | likely_benign | 0.1342 | benign | 0.156 | Stabilizing | 0.001 | N | 0.155 | neutral | N | 0.442258058 | None | None | N |
E/L | 0.472 | ambiguous | 0.4924 | ambiguous | 0.049 | Stabilizing | 0.149 | N | 0.415 | neutral | None | None | None | None | N |
E/M | 0.4106 | ambiguous | 0.4457 | ambiguous | 0.247 | Stabilizing | 0.555 | D | 0.366 | neutral | None | None | None | None | N |
E/N | 0.2333 | likely_benign | 0.2511 | benign | -0.28 | Destabilizing | 0.149 | N | 0.235 | neutral | None | None | None | None | N |
E/P | 0.9666 | likely_pathogenic | 0.9671 | pathogenic | -0.137 | Destabilizing | 0.262 | N | 0.379 | neutral | None | None | None | None | N |
E/Q | 0.1164 | likely_benign | 0.1125 | benign | -0.228 | Destabilizing | None | N | 0.19 | neutral | N | 0.456783811 | None | None | N |
E/R | 0.2455 | likely_benign | 0.2739 | benign | 0.369 | Stabilizing | 0.081 | N | 0.248 | neutral | None | None | None | None | N |
E/S | 0.1907 | likely_benign | 0.2132 | benign | -0.439 | Destabilizing | 0.035 | N | 0.271 | neutral | None | None | None | None | N |
E/T | 0.2323 | likely_benign | 0.2595 | benign | -0.238 | Destabilizing | 0.002 | N | 0.253 | neutral | None | None | None | None | N |
E/V | 0.2902 | likely_benign | 0.3155 | benign | -0.137 | Destabilizing | 0.117 | N | 0.369 | neutral | D | 0.563956635 | None | None | N |
E/W | 0.9107 | likely_pathogenic | 0.9295 | pathogenic | -0.127 | Destabilizing | 0.935 | D | 0.429 | neutral | None | None | None | None | N |
E/Y | 0.6377 | likely_pathogenic | 0.6975 | pathogenic | -0.078 | Destabilizing | 0.555 | D | 0.381 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.