Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14164 | 42715;42716;42717 | chr2:178634009;178634008;178634007 | chr2:179498736;179498735;179498734 |
N2AB | 12523 | 37792;37793;37794 | chr2:178634009;178634008;178634007 | chr2:179498736;179498735;179498734 |
N2A | 11596 | 35011;35012;35013 | chr2:178634009;178634008;178634007 | chr2:179498736;179498735;179498734 |
N2B | 5099 | 15520;15521;15522 | chr2:178634009;178634008;178634007 | chr2:179498736;179498735;179498734 |
Novex-1 | 5224 | 15895;15896;15897 | chr2:178634009;178634008;178634007 | chr2:179498736;179498735;179498734 |
Novex-2 | 5291 | 16096;16097;16098 | chr2:178634009;178634008;178634007 | chr2:179498736;179498735;179498734 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1211763723 | None | 0.998 | D | 0.489 | 0.38 | 0.455081427078 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2346 | likely_benign | 0.2543 | benign | -0.783 | Destabilizing | 0.989 | D | 0.581 | neutral | D | 0.604427349 | None | None | N |
E/C | 0.8581 | likely_pathogenic | 0.9002 | pathogenic | -0.484 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/D | 0.3008 | likely_benign | 0.3646 | ambiguous | -1.303 | Destabilizing | 0.998 | D | 0.409 | neutral | D | 0.634868425 | None | None | N |
E/F | 0.8122 | likely_pathogenic | 0.8571 | pathogenic | -0.857 | Destabilizing | 0.999 | D | 0.778 | deleterious | None | None | None | None | N |
E/G | 0.332 | likely_benign | 0.3737 | ambiguous | -1.116 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | D | 0.606858467 | None | None | N |
E/H | 0.4777 | ambiguous | 0.5721 | pathogenic | -1.199 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
E/I | 0.3981 | ambiguous | 0.4547 | ambiguous | 0.115 | Stabilizing | 0.995 | D | 0.724 | prob.delet. | None | None | None | None | N |
E/K | 0.1601 | likely_benign | 0.1921 | benign | -0.773 | Destabilizing | 0.998 | D | 0.489 | neutral | D | 0.534421295 | None | None | N |
E/L | 0.5018 | ambiguous | 0.5594 | ambiguous | 0.115 | Stabilizing | 0.983 | D | 0.688 | prob.neutral | None | None | None | None | N |
E/M | 0.5214 | ambiguous | 0.5711 | pathogenic | 0.658 | Stabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
E/N | 0.3651 | ambiguous | 0.4352 | ambiguous | -1.047 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/P | 0.9393 | likely_pathogenic | 0.9622 | pathogenic | -0.163 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
E/Q | 0.122 | likely_benign | 0.1419 | benign | -0.929 | Destabilizing | 0.999 | D | 0.603 | neutral | D | 0.582517232 | None | None | N |
E/R | 0.2694 | likely_benign | 0.3335 | benign | -0.72 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/S | 0.2467 | likely_benign | 0.2947 | benign | -1.432 | Destabilizing | 0.996 | D | 0.555 | neutral | None | None | None | None | N |
E/T | 0.2108 | likely_benign | 0.2636 | benign | -1.149 | Destabilizing | 0.998 | D | 0.724 | prob.delet. | None | None | None | None | N |
E/V | 0.2396 | likely_benign | 0.279 | benign | -0.163 | Destabilizing | 0.733 | D | 0.488 | neutral | D | 0.549617585 | None | None | N |
E/W | 0.9477 | likely_pathogenic | 0.9647 | pathogenic | -0.883 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/Y | 0.739 | likely_pathogenic | 0.8025 | pathogenic | -0.663 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.