Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14166 | 42721;42722;42723 | chr2:178634003;178634002;178634001 | chr2:179498730;179498729;179498728 |
N2AB | 12525 | 37798;37799;37800 | chr2:178634003;178634002;178634001 | chr2:179498730;179498729;179498728 |
N2A | 11598 | 35017;35018;35019 | chr2:178634003;178634002;178634001 | chr2:179498730;179498729;179498728 |
N2B | 5101 | 15526;15527;15528 | chr2:178634003;178634002;178634001 | chr2:179498730;179498729;179498728 |
Novex-1 | 5226 | 15901;15902;15903 | chr2:178634003;178634002;178634001 | chr2:179498730;179498729;179498728 |
Novex-2 | 5293 | 16102;16103;16104 | chr2:178634003;178634002;178634001 | chr2:179498730;179498729;179498728 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | 0.973 | D | 0.324 | 0.392 | 0.392702134506 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.523 | ambiguous | 0.4256 | ambiguous | -0.527 | Destabilizing | 0.973 | D | 0.324 | neutral | D | 0.589248888 | None | None | N |
S/C | 0.7222 | likely_pathogenic | 0.6606 | pathogenic | -0.306 | Destabilizing | 1.0 | D | 0.571 | neutral | D | 0.686413629 | None | None | N |
S/D | 0.9015 | likely_pathogenic | 0.8904 | pathogenic | -0.738 | Destabilizing | 0.996 | D | 0.397 | neutral | None | None | None | None | N |
S/E | 0.9736 | likely_pathogenic | 0.9636 | pathogenic | -0.679 | Destabilizing | 0.996 | D | 0.388 | neutral | None | None | None | None | N |
S/F | 0.9556 | likely_pathogenic | 0.9249 | pathogenic | -0.343 | Destabilizing | 0.999 | D | 0.645 | neutral | D | 0.5404641 | None | None | N |
S/G | 0.5027 | ambiguous | 0.4362 | ambiguous | -0.85 | Destabilizing | 0.996 | D | 0.325 | neutral | None | None | None | None | N |
S/H | 0.9465 | likely_pathogenic | 0.9382 | pathogenic | -1.358 | Destabilizing | 1.0 | D | 0.555 | neutral | None | None | None | None | N |
S/I | 0.9016 | likely_pathogenic | 0.8321 | pathogenic | 0.248 | Stabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | N |
S/K | 0.9968 | likely_pathogenic | 0.995 | pathogenic | -0.995 | Destabilizing | 0.996 | D | 0.397 | neutral | None | None | None | None | N |
S/L | 0.7417 | likely_pathogenic | 0.6316 | pathogenic | 0.248 | Stabilizing | 0.999 | D | 0.566 | neutral | None | None | None | None | N |
S/M | 0.8395 | likely_pathogenic | 0.7821 | pathogenic | 0.391 | Stabilizing | 1.0 | D | 0.557 | neutral | None | None | None | None | N |
S/N | 0.5798 | likely_pathogenic | 0.568 | pathogenic | -1.042 | Destabilizing | 0.999 | D | 0.436 | neutral | None | None | None | None | N |
S/P | 0.9704 | likely_pathogenic | 0.9495 | pathogenic | 0.025 | Stabilizing | 0.217 | N | 0.241 | neutral | D | 0.622508215 | None | None | N |
S/Q | 0.9707 | likely_pathogenic | 0.9646 | pathogenic | -0.982 | Destabilizing | 1.0 | D | 0.505 | neutral | None | None | None | None | N |
S/R | 0.9945 | likely_pathogenic | 0.9909 | pathogenic | -1.038 | Destabilizing | 1.0 | D | 0.578 | neutral | None | None | None | None | N |
S/T | 0.2063 | likely_benign | 0.1945 | benign | -0.879 | Destabilizing | 0.994 | D | 0.351 | neutral | N | 0.504217862 | None | None | N |
S/V | 0.8999 | likely_pathogenic | 0.8423 | pathogenic | 0.025 | Stabilizing | 0.999 | D | 0.591 | neutral | None | None | None | None | N |
S/W | 0.96 | likely_pathogenic | 0.9421 | pathogenic | -0.528 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | N |
S/Y | 0.9085 | likely_pathogenic | 0.8712 | pathogenic | -0.243 | Destabilizing | 0.999 | D | 0.643 | neutral | D | 0.684672034 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.