Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14167 | 42724;42725;42726 | chr2:178634000;178633999;178633998 | chr2:179498727;179498726;179498725 |
N2AB | 12526 | 37801;37802;37803 | chr2:178634000;178633999;178633998 | chr2:179498727;179498726;179498725 |
N2A | 11599 | 35020;35021;35022 | chr2:178634000;178633999;178633998 | chr2:179498727;179498726;179498725 |
N2B | 5102 | 15529;15530;15531 | chr2:178634000;178633999;178633998 | chr2:179498727;179498726;179498725 |
Novex-1 | 5227 | 15904;15905;15906 | chr2:178634000;178633999;178633998 | chr2:179498727;179498726;179498725 |
Novex-2 | 5294 | 16105;16106;16107 | chr2:178634000;178633999;178633998 | chr2:179498727;179498726;179498725 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | 0.997 | N | 0.449 | 0.492 | 0.362758974969 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
H/Y | None | None | 0.999 | D | 0.46 | 0.489 | 0.606237419447 | gnomAD-4.0.0 | 1.59221E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88274E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.7316 | likely_pathogenic | 0.6433 | pathogenic | 0.208 | Stabilizing | 0.993 | D | 0.459 | neutral | None | None | None | None | N |
H/C | 0.5845 | likely_pathogenic | 0.512 | ambiguous | 0.743 | Stabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | N |
H/D | 0.6152 | likely_pathogenic | 0.4948 | ambiguous | -0.19 | Destabilizing | 0.135 | N | 0.261 | neutral | N | 0.505416429 | None | None | N |
H/E | 0.6937 | likely_pathogenic | 0.5865 | pathogenic | -0.134 | Destabilizing | 0.971 | D | 0.415 | neutral | None | None | None | None | N |
H/F | 0.6424 | likely_pathogenic | 0.6296 | pathogenic | 1.153 | Stabilizing | 0.999 | D | 0.461 | neutral | None | None | None | None | N |
H/G | 0.7658 | likely_pathogenic | 0.6996 | pathogenic | -0.116 | Destabilizing | 0.993 | D | 0.461 | neutral | None | None | None | None | N |
H/I | 0.8142 | likely_pathogenic | 0.7469 | pathogenic | 1.059 | Stabilizing | 0.999 | D | 0.614 | neutral | None | None | None | None | N |
H/K | 0.6023 | likely_pathogenic | 0.5718 | pathogenic | 0.211 | Stabilizing | 0.993 | D | 0.382 | neutral | None | None | None | None | N |
H/L | 0.4103 | ambiguous | 0.3478 | ambiguous | 1.059 | Stabilizing | 0.999 | D | 0.555 | neutral | D | 0.553085668 | None | None | N |
H/M | 0.8492 | likely_pathogenic | 0.8102 | pathogenic | 0.746 | Stabilizing | 1.0 | D | 0.561 | neutral | None | None | None | None | N |
H/N | 0.3339 | likely_benign | 0.2584 | benign | 0.111 | Stabilizing | 0.98 | D | 0.453 | neutral | N | 0.496835219 | None | None | N |
H/P | 0.6022 | likely_pathogenic | 0.5304 | ambiguous | 0.8 | Stabilizing | 0.999 | D | 0.551 | neutral | N | 0.505400675 | None | None | N |
H/Q | 0.5747 | likely_pathogenic | 0.4741 | ambiguous | 0.276 | Stabilizing | 0.997 | D | 0.458 | neutral | D | 0.535853725 | None | None | N |
H/R | 0.3429 | ambiguous | 0.2925 | benign | -0.485 | Destabilizing | 0.997 | D | 0.449 | neutral | N | 0.508588814 | None | None | N |
H/S | 0.6125 | likely_pathogenic | 0.529 | ambiguous | 0.26 | Stabilizing | 0.985 | D | 0.423 | neutral | None | None | None | None | N |
H/T | 0.7641 | likely_pathogenic | 0.6815 | pathogenic | 0.422 | Stabilizing | 0.998 | D | 0.468 | neutral | None | None | None | None | N |
H/V | 0.7244 | likely_pathogenic | 0.6474 | pathogenic | 0.8 | Stabilizing | 0.999 | D | 0.593 | neutral | None | None | None | None | N |
H/W | 0.6847 | likely_pathogenic | 0.6794 | pathogenic | 1.222 | Stabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
H/Y | 0.2665 | likely_benign | 0.2567 | benign | 1.41 | Stabilizing | 0.999 | D | 0.46 | neutral | D | 0.61850101 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.