Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14173 | 42742;42743;42744 | chr2:178633982;178633981;178633980 | chr2:179498709;179498708;179498707 |
N2AB | 12532 | 37819;37820;37821 | chr2:178633982;178633981;178633980 | chr2:179498709;179498708;179498707 |
N2A | 11605 | 35038;35039;35040 | chr2:178633982;178633981;178633980 | chr2:179498709;179498708;179498707 |
N2B | 5108 | 15547;15548;15549 | chr2:178633982;178633981;178633980 | chr2:179498709;179498708;179498707 |
Novex-1 | 5233 | 15922;15923;15924 | chr2:178633982;178633981;178633980 | chr2:179498709;179498708;179498707 |
Novex-2 | 5300 | 16123;16124;16125 | chr2:178633982;178633981;178633980 | chr2:179498709;179498708;179498707 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.019 | N | 0.323 | 0.058 | 0.506068822696 | gnomAD-4.0.0 | 5.47485E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.87273E-05 | 0 | 6.2975E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1182 | likely_benign | 0.1289 | benign | -1.928 | Destabilizing | 0.019 | N | 0.323 | neutral | N | 0.492626104 | None | None | N |
V/C | 0.6253 | likely_pathogenic | 0.6198 | pathogenic | -0.993 | Destabilizing | 0.667 | D | 0.502 | neutral | None | None | None | None | N |
V/D | 0.1932 | likely_benign | 0.246 | benign | -2.392 | Highly Destabilizing | 0.175 | N | 0.527 | neutral | N | 0.502715164 | None | None | N |
V/E | 0.161 | likely_benign | 0.2133 | benign | -2.25 | Highly Destabilizing | 0.055 | N | 0.465 | neutral | None | None | None | None | N |
V/F | 0.1578 | likely_benign | 0.1357 | benign | -1.292 | Destabilizing | 0.602 | D | 0.537 | neutral | N | 0.510762249 | None | None | N |
V/G | 0.1857 | likely_benign | 0.1965 | benign | -2.352 | Highly Destabilizing | 0.042 | N | 0.446 | neutral | N | 0.508827218 | None | None | N |
V/H | 0.3391 | likely_benign | 0.3717 | ambiguous | -2.013 | Highly Destabilizing | 0.667 | D | 0.543 | neutral | None | None | None | None | N |
V/I | 0.08 | likely_benign | 0.0762 | benign | -0.772 | Destabilizing | 0.042 | N | 0.46 | neutral | N | 0.49177538 | None | None | N |
V/K | 0.2184 | likely_benign | 0.2372 | benign | -1.626 | Destabilizing | None | N | 0.343 | neutral | None | None | None | None | N |
V/L | 0.1448 | likely_benign | 0.1387 | benign | -0.772 | Destabilizing | 0.019 | N | 0.342 | neutral | N | 0.478735164 | None | None | N |
V/M | 0.1222 | likely_benign | 0.1095 | benign | -0.486 | Destabilizing | 0.667 | D | 0.493 | neutral | None | None | None | None | N |
V/N | 0.1377 | likely_benign | 0.1498 | benign | -1.656 | Destabilizing | 0.124 | N | 0.527 | neutral | None | None | None | None | N |
V/P | 0.7285 | likely_pathogenic | 0.7843 | pathogenic | -1.131 | Destabilizing | 0.364 | N | 0.525 | neutral | None | None | None | None | N |
V/Q | 0.1766 | likely_benign | 0.2103 | benign | -1.665 | Destabilizing | 0.22 | N | 0.538 | neutral | None | None | None | None | N |
V/R | 0.2072 | likely_benign | 0.2209 | benign | -1.258 | Destabilizing | 0.124 | N | 0.551 | neutral | None | None | None | None | N |
V/S | 0.1063 | likely_benign | 0.1181 | benign | -2.157 | Highly Destabilizing | None | N | 0.329 | neutral | None | None | None | None | N |
V/T | 0.0885 | likely_benign | 0.0956 | benign | -1.906 | Destabilizing | None | N | 0.176 | neutral | None | None | None | None | N |
V/W | 0.7271 | likely_pathogenic | 0.7023 | pathogenic | -1.741 | Destabilizing | 0.958 | D | 0.553 | neutral | None | None | None | None | N |
V/Y | 0.403 | ambiguous | 0.3991 | ambiguous | -1.371 | Destabilizing | 0.667 | D | 0.541 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.