Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14181 | 42766;42767;42768 | chr2:178633958;178633957;178633956 | chr2:179498685;179498684;179498683 |
N2AB | 12540 | 37843;37844;37845 | chr2:178633958;178633957;178633956 | chr2:179498685;179498684;179498683 |
N2A | 11613 | 35062;35063;35064 | chr2:178633958;178633957;178633956 | chr2:179498685;179498684;179498683 |
N2B | 5116 | 15571;15572;15573 | chr2:178633958;178633957;178633956 | chr2:179498685;179498684;179498683 |
Novex-1 | 5241 | 15946;15947;15948 | chr2:178633958;178633957;178633956 | chr2:179498685;179498684;179498683 |
Novex-2 | 5308 | 16147;16148;16149 | chr2:178633958;178633957;178633956 | chr2:179498685;179498684;179498683 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.981 | N | 0.49 | 0.342 | 0.603196339416 | gnomAD-4.0.0 | 1.59195E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85974E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8992 | likely_pathogenic | 0.9056 | pathogenic | -2.42 | Highly Destabilizing | 0.998 | D | 0.589 | neutral | None | None | None | None | N |
L/C | 0.9009 | likely_pathogenic | 0.9016 | pathogenic | -1.421 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
L/D | 0.996 | likely_pathogenic | 0.9975 | pathogenic | -2.69 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
L/E | 0.96 | likely_pathogenic | 0.9752 | pathogenic | -2.498 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
L/F | 0.4968 | ambiguous | 0.4969 | ambiguous | -1.566 | Destabilizing | 0.999 | D | 0.734 | prob.delet. | D | 0.677128754 | None | None | N |
L/G | 0.98 | likely_pathogenic | 0.9843 | pathogenic | -2.894 | Highly Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
L/H | 0.927 | likely_pathogenic | 0.9419 | pathogenic | -2.128 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | D | 0.678762675 | None | None | N |
L/I | 0.1018 | likely_benign | 0.0947 | benign | -1.06 | Destabilizing | 0.767 | D | 0.277 | neutral | N | 0.469403573 | None | None | N |
L/K | 0.9275 | likely_pathogenic | 0.9572 | pathogenic | -1.877 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
L/M | 0.2665 | likely_benign | 0.2571 | benign | -0.788 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
L/N | 0.9737 | likely_pathogenic | 0.9801 | pathogenic | -2.145 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
L/P | 0.977 | likely_pathogenic | 0.9855 | pathogenic | -1.495 | Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.639439359 | None | None | N |
L/Q | 0.8646 | likely_pathogenic | 0.9067 | pathogenic | -2.095 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
L/R | 0.8999 | likely_pathogenic | 0.935 | pathogenic | -1.481 | Destabilizing | 1.0 | D | 0.851 | deleterious | D | 0.678330461 | None | None | N |
L/S | 0.9706 | likely_pathogenic | 0.9735 | pathogenic | -2.763 | Highly Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
L/T | 0.8902 | likely_pathogenic | 0.8975 | pathogenic | -2.434 | Highly Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
L/V | 0.176 | likely_benign | 0.1621 | benign | -1.495 | Destabilizing | 0.981 | D | 0.49 | neutral | N | 0.510554556 | None | None | N |
L/W | 0.7958 | likely_pathogenic | 0.8213 | pathogenic | -1.874 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
L/Y | 0.8643 | likely_pathogenic | 0.8719 | pathogenic | -1.574 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.