Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14182 | 42769;42770;42771 | chr2:178633955;178633954;178633953 | chr2:179498682;179498681;179498680 |
N2AB | 12541 | 37846;37847;37848 | chr2:178633955;178633954;178633953 | chr2:179498682;179498681;179498680 |
N2A | 11614 | 35065;35066;35067 | chr2:178633955;178633954;178633953 | chr2:179498682;179498681;179498680 |
N2B | 5117 | 15574;15575;15576 | chr2:178633955;178633954;178633953 | chr2:179498682;179498681;179498680 |
Novex-1 | 5242 | 15949;15950;15951 | chr2:178633955;178633954;178633953 | chr2:179498682;179498681;179498680 |
Novex-2 | 5309 | 16150;16151;16152 | chr2:178633955;178633954;178633953 | chr2:179498682;179498681;179498680 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/P | rs794729428 | None | 0.999 | N | 0.564 | 0.472 | 0.573614764001 | gnomAD-4.0.0 | 2.05301E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69886E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.498 | ambiguous | 0.6452 | pathogenic | 0.211 | Stabilizing | 0.993 | D | 0.517 | neutral | None | None | None | None | N |
H/C | 0.3894 | ambiguous | 0.5132 | ambiguous | 0.32 | Stabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | N |
H/D | 0.4591 | ambiguous | 0.6333 | pathogenic | -0.269 | Destabilizing | 0.961 | D | 0.533 | neutral | N | 0.508614036 | None | None | N |
H/E | 0.5299 | ambiguous | 0.7086 | pathogenic | -0.253 | Destabilizing | 0.985 | D | 0.495 | neutral | None | None | None | None | N |
H/F | 0.4118 | ambiguous | 0.4708 | ambiguous | 0.834 | Stabilizing | 0.999 | D | 0.531 | neutral | None | None | None | None | N |
H/G | 0.5155 | ambiguous | 0.6697 | pathogenic | -0.018 | Destabilizing | 0.985 | D | 0.521 | neutral | None | None | None | None | N |
H/I | 0.5101 | ambiguous | 0.6341 | pathogenic | 0.784 | Stabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | N |
H/K | 0.4055 | ambiguous | 0.5744 | pathogenic | 0.09 | Stabilizing | 0.985 | D | 0.518 | neutral | None | None | None | None | N |
H/L | 0.2373 | likely_benign | 0.2945 | benign | 0.784 | Stabilizing | 0.997 | D | 0.553 | neutral | N | 0.509125856 | None | None | N |
H/M | 0.6352 | likely_pathogenic | 0.7322 | pathogenic | 0.436 | Stabilizing | 1.0 | D | 0.568 | neutral | None | None | None | None | N |
H/N | 0.1908 | likely_benign | 0.2621 | benign | -0.11 | Destabilizing | 0.4 | N | 0.227 | neutral | N | 0.493813693 | None | None | N |
H/P | 0.2405 | likely_benign | 0.3132 | benign | 0.615 | Stabilizing | 0.999 | D | 0.564 | neutral | N | 0.509125856 | None | None | N |
H/Q | 0.3128 | likely_benign | 0.4369 | ambiguous | -0.013 | Destabilizing | 0.997 | D | 0.494 | neutral | N | 0.489021949 | None | None | N |
H/R | 0.1925 | likely_benign | 0.2952 | benign | -0.368 | Destabilizing | 0.997 | D | 0.47 | neutral | N | 0.489982371 | None | None | N |
H/S | 0.3835 | ambiguous | 0.5144 | ambiguous | -0.016 | Destabilizing | 0.985 | D | 0.526 | neutral | None | None | None | None | N |
H/T | 0.4974 | ambiguous | 0.6534 | pathogenic | 0.097 | Stabilizing | 0.996 | D | 0.483 | neutral | None | None | None | None | N |
H/V | 0.4407 | ambiguous | 0.5857 | pathogenic | 0.615 | Stabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | N |
H/W | 0.4989 | ambiguous | 0.6213 | pathogenic | 0.773 | Stabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
H/Y | 0.1553 | likely_benign | 0.2026 | benign | 0.987 | Stabilizing | 0.997 | D | 0.466 | neutral | N | 0.511646681 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.