Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14189 | 42790;42791;42792 | chr2:178633934;178633933;178633932 | chr2:179498661;179498660;179498659 |
N2AB | 12548 | 37867;37868;37869 | chr2:178633934;178633933;178633932 | chr2:179498661;179498660;179498659 |
N2A | 11621 | 35086;35087;35088 | chr2:178633934;178633933;178633932 | chr2:179498661;179498660;179498659 |
N2B | 5124 | 15595;15596;15597 | chr2:178633934;178633933;178633932 | chr2:179498661;179498660;179498659 |
Novex-1 | 5249 | 15970;15971;15972 | chr2:178633934;178633933;178633932 | chr2:179498661;179498660;179498659 |
Novex-2 | 5316 | 16171;16172;16173 | chr2:178633934;178633933;178633932 | chr2:179498661;179498660;179498659 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | None | N | 0.123 | 0.163 | 0.529861178392 | gnomAD-4.0.0 | 1.59193E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85971E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.508 | ambiguous | 0.4511 | ambiguous | -1.793 | Destabilizing | 0.016 | N | 0.339 | neutral | None | None | None | None | N |
I/C | 0.7223 | likely_pathogenic | 0.5847 | pathogenic | -1.158 | Destabilizing | 0.356 | N | 0.526 | neutral | None | None | None | None | N |
I/D | 0.8766 | likely_pathogenic | 0.8421 | pathogenic | -0.987 | Destabilizing | 0.214 | N | 0.623 | neutral | None | None | None | None | N |
I/E | 0.7111 | likely_pathogenic | 0.6913 | pathogenic | -0.851 | Destabilizing | 0.072 | N | 0.586 | neutral | None | None | None | None | N |
I/F | 0.1451 | likely_benign | 0.0623 | benign | -0.999 | Destabilizing | None | N | 0.123 | neutral | N | 0.51573515 | None | None | N |
I/G | 0.8172 | likely_pathogenic | 0.7573 | pathogenic | -2.248 | Highly Destabilizing | 0.072 | N | 0.541 | neutral | None | None | None | None | N |
I/H | 0.5753 | likely_pathogenic | 0.4457 | ambiguous | -1.459 | Destabilizing | 0.628 | D | 0.593 | neutral | None | None | None | None | N |
I/K | 0.4857 | ambiguous | 0.459 | ambiguous | -1.097 | Destabilizing | 0.072 | N | 0.581 | neutral | None | None | None | None | N |
I/L | 0.097 | likely_benign | 0.0917 | benign | -0.552 | Destabilizing | 0.001 | N | 0.275 | neutral | N | 0.512367928 | None | None | N |
I/M | 0.0719 | likely_benign | 0.0634 | benign | -0.557 | Destabilizing | 0.001 | N | 0.202 | neutral | N | 0.499478153 | None | None | N |
I/N | 0.4856 | ambiguous | 0.4051 | ambiguous | -1.165 | Destabilizing | 0.171 | N | 0.627 | neutral | D | 0.660716817 | None | None | N |
I/P | 0.8664 | likely_pathogenic | 0.8589 | pathogenic | -0.938 | Destabilizing | 0.356 | N | 0.623 | neutral | None | None | None | None | N |
I/Q | 0.4485 | ambiguous | 0.4168 | ambiguous | -1.114 | Destabilizing | 0.214 | N | 0.618 | neutral | None | None | None | None | N |
I/R | 0.4157 | ambiguous | 0.3565 | ambiguous | -0.802 | Destabilizing | 0.214 | N | 0.627 | neutral | None | None | None | None | N |
I/S | 0.4505 | ambiguous | 0.382 | ambiguous | -1.943 | Destabilizing | 0.029 | N | 0.481 | neutral | D | 0.579033147 | None | None | N |
I/T | 0.3445 | ambiguous | 0.2947 | benign | -1.657 | Destabilizing | None | N | 0.193 | neutral | N | 0.509599416 | None | None | N |
I/V | 0.1072 | likely_benign | 0.1004 | benign | -0.938 | Destabilizing | 0.005 | N | 0.283 | neutral | N | 0.503537264 | None | None | N |
I/W | 0.715 | likely_pathogenic | 0.5449 | ambiguous | -1.17 | Destabilizing | 0.864 | D | 0.598 | neutral | None | None | None | None | N |
I/Y | 0.4705 | ambiguous | 0.3034 | benign | -0.882 | Destabilizing | 0.038 | N | 0.53 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.