Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14204 | 42835;42836;42837 | chr2:178633889;178633888;178633887 | chr2:179498616;179498615;179498614 |
N2AB | 12563 | 37912;37913;37914 | chr2:178633889;178633888;178633887 | chr2:179498616;179498615;179498614 |
N2A | 11636 | 35131;35132;35133 | chr2:178633889;178633888;178633887 | chr2:179498616;179498615;179498614 |
N2B | 5139 | 15640;15641;15642 | chr2:178633889;178633888;178633887 | chr2:179498616;179498615;179498614 |
Novex-1 | 5264 | 16015;16016;16017 | chr2:178633889;178633888;178633887 | chr2:179498616;179498615;179498614 |
Novex-2 | 5331 | 16216;16217;16218 | chr2:178633889;178633888;178633887 | chr2:179498616;179498615;179498614 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | None | None | 1.0 | D | 0.759 | 0.543 | 0.583209036909 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1847 | likely_benign | 0.1872 | benign | -0.79 | Destabilizing | 0.999 | D | 0.524 | neutral | N | 0.510700209 | None | None | N |
T/C | 0.6283 | likely_pathogenic | 0.6396 | pathogenic | -0.461 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
T/D | 0.66 | likely_pathogenic | 0.6749 | pathogenic | -0.168 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
T/E | 0.5887 | likely_pathogenic | 0.6045 | pathogenic | -0.193 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
T/F | 0.5185 | ambiguous | 0.5225 | ambiguous | -0.999 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
T/G | 0.3773 | ambiguous | 0.3782 | ambiguous | -1.014 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
T/H | 0.427 | ambiguous | 0.4538 | ambiguous | -1.33 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
T/I | 0.5565 | ambiguous | 0.5436 | ambiguous | -0.293 | Destabilizing | 1.0 | D | 0.766 | deleterious | D | 0.588728255 | None | None | N |
T/K | 0.2438 | likely_benign | 0.2917 | benign | -0.693 | Destabilizing | 1.0 | D | 0.765 | deleterious | N | 0.50418069 | None | None | N |
T/L | 0.2284 | likely_benign | 0.2164 | benign | -0.293 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
T/M | 0.1647 | likely_benign | 0.1566 | benign | 0.071 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/N | 0.2142 | likely_benign | 0.222 | benign | -0.581 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
T/P | 0.5968 | likely_pathogenic | 0.5654 | pathogenic | -0.428 | Destabilizing | 1.0 | D | 0.759 | deleterious | D | 0.588869207 | None | None | N |
T/Q | 0.3281 | likely_benign | 0.3628 | ambiguous | -0.802 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
T/R | 0.2419 | likely_benign | 0.275 | benign | -0.419 | Destabilizing | 1.0 | D | 0.78 | deleterious | N | 0.509887104 | None | None | N |
T/S | 0.1576 | likely_benign | 0.1577 | benign | -0.861 | Destabilizing | 0.999 | D | 0.517 | neutral | N | 0.485866674 | None | None | N |
T/V | 0.4057 | ambiguous | 0.4118 | ambiguous | -0.428 | Destabilizing | 0.999 | D | 0.593 | neutral | None | None | None | None | N |
T/W | 0.8689 | likely_pathogenic | 0.8763 | pathogenic | -0.918 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
T/Y | 0.5817 | likely_pathogenic | 0.6075 | pathogenic | -0.685 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.