Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14213 | 42862;42863;42864 | chr2:178633862;178633861;178633860 | chr2:179498589;179498588;179498587 |
N2AB | 12572 | 37939;37940;37941 | chr2:178633862;178633861;178633860 | chr2:179498589;179498588;179498587 |
N2A | 11645 | 35158;35159;35160 | chr2:178633862;178633861;178633860 | chr2:179498589;179498588;179498587 |
N2B | 5148 | 15667;15668;15669 | chr2:178633862;178633861;178633860 | chr2:179498589;179498588;179498587 |
Novex-1 | 5273 | 16042;16043;16044 | chr2:178633862;178633861;178633860 | chr2:179498589;179498588;179498587 |
Novex-2 | 5340 | 16243;16244;16245 | chr2:178633862;178633861;178633860 | chr2:179498589;179498588;179498587 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | 0.581 | D | 0.675 | 0.322 | 0.208816687407 | gnomAD-4.0.0 | 1.36875E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.5208E-05 | None | 0 | 0 | 8.99611E-07 | 0 | 0 |
A/T | rs892930093 | None | 0.41 | D | 0.749 | 0.334 | 0.212008924253 | gnomAD-4.0.0 | 1.36875E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.5208E-05 | None | 0 | 0 | 8.99611E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5826 | likely_pathogenic | 0.6046 | pathogenic | -0.764 | Destabilizing | 0.98 | D | 0.791 | deleterious | None | None | None | None | N |
A/D | 0.9963 | likely_pathogenic | 0.9955 | pathogenic | -2.152 | Highly Destabilizing | 0.908 | D | 0.909 | deleterious | D | 0.535363411 | None | None | N |
A/E | 0.9913 | likely_pathogenic | 0.9894 | pathogenic | -1.89 | Destabilizing | 0.929 | D | 0.863 | deleterious | None | None | None | None | N |
A/F | 0.7967 | likely_pathogenic | 0.7936 | pathogenic | -0.493 | Destabilizing | 0.866 | D | 0.915 | deleterious | None | None | None | None | N |
A/G | 0.3147 | likely_benign | 0.3476 | ambiguous | -1.502 | Destabilizing | 0.738 | D | 0.657 | neutral | D | 0.535363411 | None | None | N |
A/H | 0.9945 | likely_pathogenic | 0.993 | pathogenic | -2.037 | Highly Destabilizing | 0.993 | D | 0.898 | deleterious | None | None | None | None | N |
A/I | 0.6252 | likely_pathogenic | 0.5022 | ambiguous | 0.531 | Stabilizing | 0.241 | N | 0.809 | deleterious | None | None | None | None | N |
A/K | 0.9979 | likely_pathogenic | 0.9971 | pathogenic | -0.888 | Destabilizing | 0.929 | D | 0.865 | deleterious | None | None | None | None | N |
A/L | 0.4408 | ambiguous | 0.4199 | ambiguous | 0.531 | Stabilizing | 0.48 | N | 0.756 | deleterious | None | None | None | None | N |
A/M | 0.6319 | likely_pathogenic | 0.5802 | pathogenic | 0.238 | Stabilizing | 0.961 | D | 0.868 | deleterious | None | None | None | None | N |
A/N | 0.9835 | likely_pathogenic | 0.9808 | pathogenic | -1.332 | Destabilizing | 0.976 | D | 0.906 | deleterious | None | None | None | None | N |
A/P | 0.9943 | likely_pathogenic | 0.9909 | pathogenic | 0.077 | Stabilizing | 0.968 | D | 0.874 | deleterious | D | 0.535363411 | None | None | N |
A/Q | 0.9853 | likely_pathogenic | 0.9828 | pathogenic | -1.009 | Destabilizing | 0.976 | D | 0.871 | deleterious | None | None | None | None | N |
A/R | 0.9929 | likely_pathogenic | 0.991 | pathogenic | -1.209 | Destabilizing | 0.929 | D | 0.869 | deleterious | None | None | None | None | N |
A/S | 0.5465 | ambiguous | 0.4775 | ambiguous | -1.754 | Destabilizing | 0.581 | D | 0.675 | neutral | D | 0.535363411 | None | None | N |
A/T | 0.5745 | likely_pathogenic | 0.4284 | ambiguous | -1.349 | Destabilizing | 0.41 | N | 0.749 | deleterious | D | 0.533787849 | None | None | N |
A/V | 0.2933 | likely_benign | 0.1904 | benign | 0.077 | Stabilizing | 0.01 | N | 0.417 | neutral | N | 0.436280857 | None | None | N |
A/W | 0.9939 | likely_pathogenic | 0.9934 | pathogenic | -1.359 | Destabilizing | 0.993 | D | 0.895 | deleterious | None | None | None | None | N |
A/Y | 0.9581 | likely_pathogenic | 0.9596 | pathogenic | -0.742 | Destabilizing | 0.929 | D | 0.916 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.