Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14215 | 42868;42869;42870 | chr2:178633856;178633855;178633854 | chr2:179498583;179498582;179498581 |
N2AB | 12574 | 37945;37946;37947 | chr2:178633856;178633855;178633854 | chr2:179498583;179498582;179498581 |
N2A | 11647 | 35164;35165;35166 | chr2:178633856;178633855;178633854 | chr2:179498583;179498582;179498581 |
N2B | 5150 | 15673;15674;15675 | chr2:178633856;178633855;178633854 | chr2:179498583;179498582;179498581 |
Novex-1 | 5275 | 16048;16049;16050 | chr2:178633856;178633855;178633854 | chr2:179498583;179498582;179498581 |
Novex-2 | 5342 | 16249;16250;16251 | chr2:178633856;178633855;178633854 | chr2:179498583;179498582;179498581 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.998 | D | 0.819 | 0.568 | 0.799399892791 | gnomAD-4.0.0 | 1.59218E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85966E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4068 | ambiguous | 0.3777 | ambiguous | -1.824 | Destabilizing | 0.044 | N | 0.308 | neutral | N | 0.420626076 | None | None | N |
V/C | 0.8669 | likely_pathogenic | 0.872 | pathogenic | -1.476 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
V/D | 0.9345 | likely_pathogenic | 0.9091 | pathogenic | -1.811 | Destabilizing | 0.994 | D | 0.836 | deleterious | D | 0.594114673 | None | None | N |
V/E | 0.9304 | likely_pathogenic | 0.9103 | pathogenic | -1.637 | Destabilizing | 0.996 | D | 0.789 | deleterious | None | None | None | None | N |
V/F | 0.5662 | likely_pathogenic | 0.5047 | ambiguous | -1.045 | Destabilizing | 0.998 | D | 0.819 | deleterious | D | 0.569486071 | None | None | N |
V/G | 0.553 | ambiguous | 0.5229 | ambiguous | -2.332 | Highly Destabilizing | 0.925 | D | 0.767 | deleterious | D | 0.634744327 | None | None | N |
V/H | 0.9687 | likely_pathogenic | 0.9553 | pathogenic | -1.91 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
V/I | 0.1582 | likely_benign | 0.149 | benign | -0.446 | Destabilizing | 0.954 | D | 0.65 | neutral | D | 0.564203463 | None | None | N |
V/K | 0.9589 | likely_pathogenic | 0.9422 | pathogenic | -1.609 | Destabilizing | 0.991 | D | 0.789 | deleterious | None | None | None | None | N |
V/L | 0.5907 | likely_pathogenic | 0.5429 | ambiguous | -0.446 | Destabilizing | 0.91 | D | 0.625 | neutral | D | 0.525666689 | None | None | N |
V/M | 0.6015 | likely_pathogenic | 0.5282 | ambiguous | -0.495 | Destabilizing | 0.999 | D | 0.72 | prob.delet. | None | None | None | None | N |
V/N | 0.8752 | likely_pathogenic | 0.8216 | pathogenic | -1.767 | Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | N |
V/P | 0.9791 | likely_pathogenic | 0.9723 | pathogenic | -0.873 | Destabilizing | 0.996 | D | 0.807 | deleterious | None | None | None | None | N |
V/Q | 0.9371 | likely_pathogenic | 0.9159 | pathogenic | -1.655 | Destabilizing | 0.999 | D | 0.818 | deleterious | None | None | None | None | N |
V/R | 0.9342 | likely_pathogenic | 0.9134 | pathogenic | -1.376 | Destabilizing | 0.996 | D | 0.841 | deleterious | None | None | None | None | N |
V/S | 0.6907 | likely_pathogenic | 0.6179 | pathogenic | -2.454 | Highly Destabilizing | 0.942 | D | 0.746 | deleterious | None | None | None | None | N |
V/T | 0.6403 | likely_pathogenic | 0.5631 | ambiguous | -2.124 | Highly Destabilizing | 0.97 | D | 0.675 | neutral | None | None | None | None | N |
V/W | 0.9827 | likely_pathogenic | 0.9757 | pathogenic | -1.423 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
V/Y | 0.9011 | likely_pathogenic | 0.8902 | pathogenic | -1.059 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.