Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14217 | 42874;42875;42876 | chr2:178633850;178633849;178633848 | chr2:179498577;179498576;179498575 |
N2AB | 12576 | 37951;37952;37953 | chr2:178633850;178633849;178633848 | chr2:179498577;179498576;179498575 |
N2A | 11649 | 35170;35171;35172 | chr2:178633850;178633849;178633848 | chr2:179498577;179498576;179498575 |
N2B | 5152 | 15679;15680;15681 | chr2:178633850;178633849;178633848 | chr2:179498577;179498576;179498575 |
Novex-1 | 5277 | 16054;16055;16056 | chr2:178633850;178633849;178633848 | chr2:179498577;179498576;179498575 |
Novex-2 | 5344 | 16255;16256;16257 | chr2:178633850;178633849;178633848 | chr2:179498577;179498576;179498575 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs727503629 | 0.514 | 0.012 | N | 0.311 | 0.088 | 0.191931220699 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs727503629 | 0.514 | 0.012 | N | 0.311 | 0.088 | 0.191931220699 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs727503629 | 0.514 | 0.012 | N | 0.311 | 0.088 | 0.191931220699 | gnomAD-4.0.0 | 1.85961E-06 | None | None | None | None | N | None | 4.00652E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1099 | likely_benign | 0.0953 | benign | -0.072 | Destabilizing | None | N | 0.13 | neutral | N | 0.442353121 | None | None | N |
E/C | 0.6252 | likely_pathogenic | 0.4856 | ambiguous | -0.239 | Destabilizing | 0.676 | D | 0.413 | neutral | None | None | None | None | N |
E/D | 0.0431 | likely_benign | 0.0401 | benign | -0.352 | Destabilizing | None | N | 0.105 | neutral | N | 0.385137438 | None | None | N |
E/F | 0.5198 | ambiguous | 0.4037 | ambiguous | -0.025 | Destabilizing | 0.356 | N | 0.439 | neutral | None | None | None | None | N |
E/G | 0.0588 | likely_benign | 0.0598 | benign | -0.2 | Destabilizing | None | N | 0.132 | neutral | N | 0.292997733 | None | None | N |
E/H | 0.2617 | likely_benign | 0.1856 | benign | 0.577 | Stabilizing | 0.214 | N | 0.365 | neutral | None | None | None | None | N |
E/I | 0.2978 | likely_benign | 0.2266 | benign | 0.211 | Stabilizing | 0.214 | N | 0.491 | neutral | None | None | None | None | N |
E/K | 0.1681 | likely_benign | 0.1421 | benign | 0.44 | Stabilizing | 0.012 | N | 0.311 | neutral | N | 0.432008689 | None | None | N |
E/L | 0.2945 | likely_benign | 0.2384 | benign | 0.211 | Stabilizing | 0.072 | N | 0.447 | neutral | None | None | None | None | N |
E/M | 0.3633 | ambiguous | 0.2946 | benign | -0.011 | Destabilizing | 0.628 | D | 0.416 | neutral | None | None | None | None | N |
E/N | 0.0732 | likely_benign | 0.0479 | benign | 0.054 | Stabilizing | None | N | 0.105 | neutral | None | None | None | None | N |
E/P | 0.4428 | ambiguous | 0.3895 | ambiguous | 0.135 | Stabilizing | 0.136 | N | 0.419 | neutral | None | None | None | None | N |
E/Q | 0.1351 | likely_benign | 0.1195 | benign | 0.088 | Stabilizing | 0.055 | N | 0.362 | neutral | N | 0.485490454 | None | None | N |
E/R | 0.254 | likely_benign | 0.2095 | benign | 0.69 | Stabilizing | 0.072 | N | 0.322 | neutral | None | None | None | None | N |
E/S | 0.0917 | likely_benign | 0.0745 | benign | -0.048 | Destabilizing | 0.007 | N | 0.269 | neutral | None | None | None | None | N |
E/T | 0.1308 | likely_benign | 0.1108 | benign | 0.071 | Stabilizing | 0.016 | N | 0.328 | neutral | None | None | None | None | N |
E/V | 0.1994 | likely_benign | 0.1554 | benign | 0.135 | Stabilizing | 0.029 | N | 0.397 | neutral | N | 0.4962029 | None | None | N |
E/W | 0.7413 | likely_pathogenic | 0.6576 | pathogenic | 0.052 | Stabilizing | 0.864 | D | 0.428 | neutral | None | None | None | None | N |
E/Y | 0.3011 | likely_benign | 0.2151 | benign | 0.202 | Stabilizing | 0.628 | D | 0.429 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.