Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14234 | 42925;42926;42927 | chr2:178633659;178633658;178633657 | chr2:179498386;179498385;179498384 |
N2AB | 12593 | 38002;38003;38004 | chr2:178633659;178633658;178633657 | chr2:179498386;179498385;179498384 |
N2A | 11666 | 35221;35222;35223 | chr2:178633659;178633658;178633657 | chr2:179498386;179498385;179498384 |
N2B | 5169 | 15730;15731;15732 | chr2:178633659;178633658;178633657 | chr2:179498386;179498385;179498384 |
Novex-1 | 5294 | 16105;16106;16107 | chr2:178633659;178633658;178633657 | chr2:179498386;179498385;179498384 |
Novex-2 | 5361 | 16306;16307;16308 | chr2:178633659;178633658;178633657 | chr2:179498386;179498385;179498384 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 1.0 | N | 0.751 | 0.464 | 0.333906830038 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1434 | likely_benign | 0.1567 | benign | -0.826 | Destabilizing | 0.999 | D | 0.494 | neutral | N | 0.486262267 | None | None | N |
T/C | 0.6399 | likely_pathogenic | 0.695 | pathogenic | -0.442 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | N |
T/D | 0.6638 | likely_pathogenic | 0.7244 | pathogenic | 0.125 | Stabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
T/E | 0.469 | ambiguous | 0.5409 | ambiguous | 0.177 | Stabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
T/F | 0.4512 | ambiguous | 0.4758 | ambiguous | -0.74 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
T/G | 0.4963 | ambiguous | 0.5566 | ambiguous | -1.123 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
T/H | 0.4431 | ambiguous | 0.513 | ambiguous | -1.187 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
T/I | 0.1832 | likely_benign | 0.1936 | benign | -0.11 | Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.443656497 | None | None | N |
T/K | 0.279 | likely_benign | 0.339 | benign | -0.468 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
T/L | 0.1216 | likely_benign | 0.1383 | benign | -0.11 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | N |
T/M | 0.118 | likely_benign | 0.1208 | benign | -0.048 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
T/N | 0.2484 | likely_benign | 0.2776 | benign | -0.569 | Destabilizing | 1.0 | D | 0.757 | deleterious | D | 0.589138302 | None | None | N |
T/P | 0.3615 | ambiguous | 0.4073 | ambiguous | -0.316 | Destabilizing | 1.0 | D | 0.743 | deleterious | D | 0.627693261 | None | None | N |
T/Q | 0.3432 | ambiguous | 0.4066 | ambiguous | -0.601 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
T/R | 0.2437 | likely_benign | 0.2876 | benign | -0.322 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
T/S | 0.2037 | likely_benign | 0.222 | benign | -0.923 | Destabilizing | 0.999 | D | 0.486 | neutral | N | 0.453139732 | None | None | N |
T/V | 0.1497 | likely_benign | 0.1599 | benign | -0.316 | Destabilizing | 0.999 | D | 0.59 | neutral | None | None | None | None | N |
T/W | 0.7978 | likely_pathogenic | 0.8471 | pathogenic | -0.703 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
T/Y | 0.5133 | ambiguous | 0.5727 | pathogenic | -0.44 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.