Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14238 | 42937;42938;42939 | chr2:178633647;178633646;178633645 | chr2:179498374;179498373;179498372 |
N2AB | 12597 | 38014;38015;38016 | chr2:178633647;178633646;178633645 | chr2:179498374;179498373;179498372 |
N2A | 11670 | 35233;35234;35235 | chr2:178633647;178633646;178633645 | chr2:179498374;179498373;179498372 |
N2B | 5173 | 15742;15743;15744 | chr2:178633647;178633646;178633645 | chr2:179498374;179498373;179498372 |
Novex-1 | 5298 | 16117;16118;16119 | chr2:178633647;178633646;178633645 | chr2:179498374;179498373;179498372 |
Novex-2 | 5365 | 16318;16319;16320 | chr2:178633647;178633646;178633645 | chr2:179498374;179498373;179498372 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs1438979717 | None | None | N | 0.093 | 0.122 | 0.130388298395 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
H/Q | rs1438979717 | None | None | N | 0.093 | 0.122 | 0.130388298395 | gnomAD-4.0.0 | 2.73843E-06 | None | None | None | None | N | None | 0 | 4.47948E-05 | None | 0 | 0 | None | 0 | 0 | 1.79942E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1641 | likely_benign | 0.1921 | benign | 0.417 | Stabilizing | 0.048 | N | 0.246 | neutral | None | None | None | None | N |
H/C | 0.2206 | likely_benign | 0.1978 | benign | 0.64 | Stabilizing | 0.958 | D | 0.237 | neutral | None | None | None | None | N |
H/D | 0.1702 | likely_benign | 0.1853 | benign | -0.12 | Destabilizing | 0.081 | N | 0.262 | neutral | N | 0.417729981 | None | None | N |
H/E | 0.1659 | likely_benign | 0.2035 | benign | -0.116 | Destabilizing | 0.025 | N | 0.135 | neutral | None | None | None | None | N |
H/F | 0.2993 | likely_benign | 0.2697 | benign | 0.932 | Stabilizing | 0.667 | D | 0.337 | neutral | None | None | None | None | N |
H/G | 0.1992 | likely_benign | 0.2243 | benign | 0.187 | Stabilizing | 0.104 | N | 0.261 | neutral | None | None | None | None | N |
H/I | 0.2638 | likely_benign | 0.2553 | benign | 0.986 | Stabilizing | 0.364 | N | 0.343 | neutral | None | None | None | None | N |
H/K | 0.156 | likely_benign | 0.1916 | benign | 0.327 | Stabilizing | 0.025 | N | 0.201 | neutral | None | None | None | None | N |
H/L | 0.1108 | likely_benign | 0.1056 | benign | 0.986 | Stabilizing | 0.081 | N | 0.284 | neutral | N | 0.478388083 | None | None | N |
H/M | 0.3327 | likely_benign | 0.3804 | ambiguous | 0.694 | Stabilizing | 0.667 | D | 0.262 | neutral | None | None | None | None | N |
H/N | 0.0858 | likely_benign | 0.0822 | benign | 0.256 | Stabilizing | 0.081 | N | 0.226 | neutral | N | 0.459876114 | None | None | N |
H/P | 0.1668 | likely_benign | 0.1515 | benign | 0.821 | Stabilizing | 0.301 | N | 0.325 | neutral | N | 0.475629951 | None | None | N |
H/Q | 0.1076 | likely_benign | 0.1271 | benign | 0.313 | Stabilizing | None | N | 0.093 | neutral | N | 0.308157083 | None | None | N |
H/R | 0.0901 | likely_benign | 0.0973 | benign | -0.159 | Destabilizing | None | N | 0.129 | neutral | N | 0.402393442 | None | None | N |
H/S | 0.1526 | likely_benign | 0.1637 | benign | 0.376 | Stabilizing | 0.104 | N | 0.258 | neutral | None | None | None | None | N |
H/T | 0.1661 | likely_benign | 0.1893 | benign | 0.472 | Stabilizing | 0.104 | N | 0.271 | neutral | None | None | None | None | N |
H/V | 0.1926 | likely_benign | 0.2082 | benign | 0.821 | Stabilizing | 0.22 | N | 0.335 | neutral | None | None | None | None | N |
H/W | 0.336 | likely_benign | 0.363 | ambiguous | 0.838 | Stabilizing | 0.958 | D | 0.246 | neutral | None | None | None | None | N |
H/Y | 0.1109 | likely_benign | 0.0975 | benign | 1.124 | Stabilizing | 0.301 | N | 0.263 | neutral | N | 0.485408281 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.