Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14239 | 42940;42941;42942 | chr2:178633644;178633643;178633642 | chr2:179498371;179498370;179498369 |
N2AB | 12598 | 38017;38018;38019 | chr2:178633644;178633643;178633642 | chr2:179498371;179498370;179498369 |
N2A | 11671 | 35236;35237;35238 | chr2:178633644;178633643;178633642 | chr2:179498371;179498370;179498369 |
N2B | 5174 | 15745;15746;15747 | chr2:178633644;178633643;178633642 | chr2:179498371;179498370;179498369 |
Novex-1 | 5299 | 16120;16121;16122 | chr2:178633644;178633643;178633642 | chr2:179498371;179498370;179498369 |
Novex-2 | 5366 | 16321;16322;16323 | chr2:178633644;178633643;178633642 | chr2:179498371;179498370;179498369 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs1050740085 | None | 1.0 | N | 0.611 | 0.305 | 0.239305524855 | gnomAD-4.0.0 | 8.40225E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.18751E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4889 | ambiguous | 0.3655 | ambiguous | -0.135 | Destabilizing | 1.0 | D | 0.753 | deleterious | D | 0.570942855 | None | None | N |
D/C | 0.9061 | likely_pathogenic | 0.8419 | pathogenic | 0.154 | Stabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
D/E | 0.3946 | ambiguous | 0.317 | benign | -0.292 | Destabilizing | 1.0 | D | 0.434 | neutral | D | 0.550699244 | None | None | N |
D/F | 0.9487 | likely_pathogenic | 0.8934 | pathogenic | -0.243 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
D/G | 0.3534 | ambiguous | 0.2541 | benign | -0.312 | Destabilizing | 1.0 | D | 0.742 | deleterious | D | 0.613323011 | None | None | N |
D/H | 0.6389 | likely_pathogenic | 0.5199 | ambiguous | -0.117 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | D | 0.578548968 | None | None | N |
D/I | 0.8847 | likely_pathogenic | 0.7743 | pathogenic | 0.273 | Stabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
D/K | 0.788 | likely_pathogenic | 0.669 | pathogenic | 0.341 | Stabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
D/L | 0.8758 | likely_pathogenic | 0.7667 | pathogenic | 0.273 | Stabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
D/M | 0.9485 | likely_pathogenic | 0.9015 | pathogenic | 0.393 | Stabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
D/N | 0.1373 | likely_benign | 0.1051 | benign | 0.182 | Stabilizing | 1.0 | D | 0.611 | neutral | N | 0.45203435 | None | None | N |
D/P | 0.6788 | likely_pathogenic | 0.6565 | pathogenic | 0.159 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
D/Q | 0.7083 | likely_pathogenic | 0.6078 | pathogenic | 0.195 | Stabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
D/R | 0.8206 | likely_pathogenic | 0.7091 | pathogenic | 0.446 | Stabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
D/S | 0.2362 | likely_benign | 0.1724 | benign | 0.066 | Stabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
D/T | 0.5629 | ambiguous | 0.4609 | ambiguous | 0.195 | Stabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
D/V | 0.7569 | likely_pathogenic | 0.5986 | pathogenic | 0.159 | Stabilizing | 1.0 | D | 0.784 | deleterious | D | 0.541843204 | None | None | N |
D/W | 0.9849 | likely_pathogenic | 0.9764 | pathogenic | -0.189 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
D/Y | 0.7094 | likely_pathogenic | 0.5406 | ambiguous | -0.025 | Destabilizing | 1.0 | D | 0.765 | deleterious | D | 0.63002378 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.