Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14246 | 42961;42962;42963 | chr2:178633623;178633622;178633621 | chr2:179498350;179498349;179498348 |
N2AB | 12605 | 38038;38039;38040 | chr2:178633623;178633622;178633621 | chr2:179498350;179498349;179498348 |
N2A | 11678 | 35257;35258;35259 | chr2:178633623;178633622;178633621 | chr2:179498350;179498349;179498348 |
N2B | 5181 | 15766;15767;15768 | chr2:178633623;178633622;178633621 | chr2:179498350;179498349;179498348 |
Novex-1 | 5306 | 16141;16142;16143 | chr2:178633623;178633622;178633621 | chr2:179498350;179498349;179498348 |
Novex-2 | 5373 | 16342;16343;16344 | chr2:178633623;178633622;178633621 | chr2:179498350;179498349;179498348 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.928 | N | 0.439 | 0.104 | 0.134241683229 | gnomAD-4.0.0 | 1.36946E-06 | None | None | None | None | N | None | 2.99115E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9993E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3685 | ambiguous | 0.2646 | benign | -0.453 | Destabilizing | 0.978 | D | 0.681 | prob.neutral | N | 0.468373354 | None | None | N |
D/C | 0.9292 | likely_pathogenic | 0.8567 | pathogenic | -0.051 | Destabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | N |
D/E | 0.2692 | likely_benign | 0.2059 | benign | -0.508 | Destabilizing | 0.928 | D | 0.439 | neutral | N | 0.438953191 | None | None | N |
D/F | 0.9211 | likely_pathogenic | 0.8292 | pathogenic | -0.226 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
D/G | 0.3079 | likely_benign | 0.2046 | benign | -0.731 | Destabilizing | 0.865 | D | 0.614 | neutral | N | 0.447376727 | None | None | N |
D/H | 0.7004 | likely_pathogenic | 0.5539 | ambiguous | -0.362 | Destabilizing | 0.994 | D | 0.74 | deleterious | N | 0.508014656 | None | None | N |
D/I | 0.859 | likely_pathogenic | 0.6787 | pathogenic | 0.255 | Stabilizing | 0.992 | D | 0.773 | deleterious | None | None | None | None | N |
D/K | 0.7094 | likely_pathogenic | 0.5744 | pathogenic | 0.069 | Stabilizing | 0.968 | D | 0.702 | prob.neutral | None | None | None | None | N |
D/L | 0.8126 | likely_pathogenic | 0.6561 | pathogenic | 0.255 | Stabilizing | 0.992 | D | 0.745 | deleterious | None | None | None | None | N |
D/M | 0.8805 | likely_pathogenic | 0.7844 | pathogenic | 0.545 | Stabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | N |
D/N | 0.2268 | likely_benign | 0.1389 | benign | -0.363 | Destabilizing | 0.085 | N | 0.363 | neutral | N | 0.474976619 | None | None | N |
D/P | 0.988 | likely_pathogenic | 0.9601 | pathogenic | 0.043 | Stabilizing | 0.992 | D | 0.745 | deleterious | None | None | None | None | N |
D/Q | 0.5853 | likely_pathogenic | 0.5086 | ambiguous | -0.285 | Destabilizing | 0.983 | D | 0.733 | prob.delet. | None | None | None | None | N |
D/R | 0.7894 | likely_pathogenic | 0.6556 | pathogenic | 0.198 | Stabilizing | 0.983 | D | 0.745 | deleterious | None | None | None | None | N |
D/S | 0.2831 | likely_benign | 0.1948 | benign | -0.504 | Destabilizing | 0.895 | D | 0.609 | neutral | None | None | None | None | N |
D/T | 0.5271 | ambiguous | 0.3876 | ambiguous | -0.281 | Destabilizing | 0.983 | D | 0.705 | prob.neutral | None | None | None | None | N |
D/V | 0.6592 | likely_pathogenic | 0.4331 | ambiguous | 0.043 | Stabilizing | 0.989 | D | 0.745 | deleterious | D | 0.63322468 | None | None | N |
D/W | 0.9765 | likely_pathogenic | 0.9517 | pathogenic | -0.045 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
D/Y | 0.5861 | likely_pathogenic | 0.4047 | ambiguous | 0.023 | Stabilizing | 0.999 | D | 0.758 | deleterious | D | 0.5470707 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.