Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14247 | 42964;42965;42966 | chr2:178633620;178633619;178633618 | chr2:179498347;179498346;179498345 |
N2AB | 12606 | 38041;38042;38043 | chr2:178633620;178633619;178633618 | chr2:179498347;179498346;179498345 |
N2A | 11679 | 35260;35261;35262 | chr2:178633620;178633619;178633618 | chr2:179498347;179498346;179498345 |
N2B | 5182 | 15769;15770;15771 | chr2:178633620;178633619;178633618 | chr2:179498347;179498346;179498345 |
Novex-1 | 5307 | 16144;16145;16146 | chr2:178633620;178633619;178633618 | chr2:179498347;179498346;179498345 |
Novex-2 | 5374 | 16345;16346;16347 | chr2:178633620;178633619;178633618 | chr2:179498347;179498346;179498345 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1017956154 | None | 0.001 | N | 0.113 | 0.064 | 0.132336055621 | gnomAD-4.0.0 | 6.84493E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99628E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2108 | likely_benign | 0.1585 | benign | -0.729 | Destabilizing | 0.007 | N | 0.226 | neutral | N | 0.450327924 | None | None | N |
E/C | 0.9231 | likely_pathogenic | 0.8699 | pathogenic | -0.327 | Destabilizing | 0.987 | D | 0.437 | neutral | None | None | None | None | N |
E/D | 0.0853 | likely_benign | 0.0773 | benign | -0.84 | Destabilizing | 0.001 | N | 0.113 | neutral | N | 0.43253157 | None | None | N |
E/F | 0.8071 | likely_pathogenic | 0.7142 | pathogenic | -0.376 | Destabilizing | 0.953 | D | 0.435 | neutral | None | None | None | None | N |
E/G | 0.2782 | likely_benign | 0.1975 | benign | -1.035 | Destabilizing | 0.521 | D | 0.391 | neutral | D | 0.59794415 | None | None | N |
E/H | 0.6173 | likely_pathogenic | 0.5305 | ambiguous | -0.559 | Destabilizing | 0.953 | D | 0.383 | neutral | None | None | None | None | N |
E/I | 0.4135 | ambiguous | 0.2985 | benign | 0.082 | Stabilizing | 0.91 | D | 0.451 | neutral | None | None | None | None | N |
E/K | 0.3 | likely_benign | 0.2146 | benign | -0.4 | Destabilizing | 0.028 | N | 0.157 | neutral | N | 0.444011026 | None | None | N |
E/L | 0.5411 | ambiguous | 0.4257 | ambiguous | 0.082 | Stabilizing | 0.59 | D | 0.452 | neutral | None | None | None | None | N |
E/M | 0.5865 | likely_pathogenic | 0.4556 | ambiguous | 0.424 | Stabilizing | 0.996 | D | 0.407 | neutral | None | None | None | None | N |
E/N | 0.2315 | likely_benign | 0.1812 | benign | -0.77 | Destabilizing | 0.59 | D | 0.261 | neutral | None | None | None | None | N |
E/P | 0.6406 | likely_pathogenic | 0.6023 | pathogenic | -0.167 | Destabilizing | 0.854 | D | 0.415 | neutral | None | None | None | None | N |
E/Q | 0.2449 | likely_benign | 0.2002 | benign | -0.676 | Destabilizing | 0.078 | N | 0.22 | neutral | N | 0.440553682 | None | None | N |
E/R | 0.4756 | ambiguous | 0.3785 | ambiguous | -0.151 | Destabilizing | 0.59 | D | 0.335 | neutral | None | None | None | None | N |
E/S | 0.2305 | likely_benign | 0.1787 | benign | -1.011 | Destabilizing | 0.373 | N | 0.297 | neutral | None | None | None | None | N |
E/T | 0.2179 | likely_benign | 0.1767 | benign | -0.767 | Destabilizing | 0.742 | D | 0.355 | neutral | None | None | None | None | N |
E/V | 0.2639 | likely_benign | 0.1945 | benign | -0.167 | Destabilizing | 0.521 | D | 0.435 | neutral | N | 0.450438219 | None | None | N |
E/W | 0.9389 | likely_pathogenic | 0.902 | pathogenic | -0.172 | Destabilizing | 0.996 | D | 0.543 | neutral | None | None | None | None | N |
E/Y | 0.7072 | likely_pathogenic | 0.5971 | pathogenic | -0.148 | Destabilizing | 0.984 | D | 0.427 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.