Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14253 | 42982;42983;42984 | chr2:178633602;178633601;178633600 | chr2:179498329;179498328;179498327 |
N2AB | 12612 | 38059;38060;38061 | chr2:178633602;178633601;178633600 | chr2:179498329;179498328;179498327 |
N2A | 11685 | 35278;35279;35280 | chr2:178633602;178633601;178633600 | chr2:179498329;179498328;179498327 |
N2B | 5188 | 15787;15788;15789 | chr2:178633602;178633601;178633600 | chr2:179498329;179498328;179498327 |
Novex-1 | 5313 | 16162;16163;16164 | chr2:178633602;178633601;178633600 | chr2:179498329;179498328;179498327 |
Novex-2 | 5380 | 16363;16364;16365 | chr2:178633602;178633601;178633600 | chr2:179498329;179498328;179498327 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs1276212237 | None | 0.015 | D | 0.296 | 0.244 | 0.265010934533 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/Q | rs1276212237 | None | 0.015 | D | 0.296 | 0.244 | 0.265010934533 | gnomAD-4.0.0 | 2.56379E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78806E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4374 | ambiguous | 0.3589 | ambiguous | -1.058 | Destabilizing | 0.002 | N | 0.391 | neutral | D | 0.602123773 | None | None | N |
E/C | 0.9738 | likely_pathogenic | 0.9727 | pathogenic | -0.554 | Destabilizing | 0.947 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/D | 0.4633 | ambiguous | 0.4977 | ambiguous | -1.211 | Destabilizing | 0.334 | N | 0.482 | neutral | D | 0.606297485 | None | None | N |
E/F | 0.9446 | likely_pathogenic | 0.9366 | pathogenic | -0.749 | Destabilizing | 0.826 | D | 0.751 | deleterious | None | None | None | None | N |
E/G | 0.6625 | likely_pathogenic | 0.6104 | pathogenic | -1.415 | Destabilizing | 0.201 | N | 0.659 | neutral | D | 0.657072294 | None | None | N |
E/H | 0.8597 | likely_pathogenic | 0.8587 | pathogenic | -1.062 | Destabilizing | 0.947 | D | 0.653 | neutral | None | None | None | None | N |
E/I | 0.6755 | likely_pathogenic | 0.6599 | pathogenic | -0.079 | Destabilizing | 0.7 | D | 0.763 | deleterious | None | None | None | None | N |
E/K | 0.5432 | ambiguous | 0.4991 | ambiguous | -0.759 | Destabilizing | 0.201 | N | 0.531 | neutral | D | 0.555706315 | None | None | N |
E/L | 0.8177 | likely_pathogenic | 0.7942 | pathogenic | -0.079 | Destabilizing | 0.539 | D | 0.733 | prob.delet. | None | None | None | None | N |
E/M | 0.7801 | likely_pathogenic | 0.735 | pathogenic | 0.469 | Stabilizing | 0.947 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/N | 0.7161 | likely_pathogenic | 0.6969 | pathogenic | -1.114 | Destabilizing | 0.7 | D | 0.631 | neutral | None | None | None | None | N |
E/P | 0.9888 | likely_pathogenic | 0.9908 | pathogenic | -0.385 | Destabilizing | 0.7 | D | 0.761 | deleterious | None | None | None | None | N |
E/Q | 0.3632 | ambiguous | 0.3363 | benign | -1.005 | Destabilizing | 0.015 | N | 0.296 | neutral | D | 0.554679116 | None | None | N |
E/R | 0.6855 | likely_pathogenic | 0.6507 | pathogenic | -0.591 | Destabilizing | 0.539 | D | 0.643 | neutral | None | None | None | None | N |
E/S | 0.5808 | likely_pathogenic | 0.5134 | ambiguous | -1.512 | Destabilizing | 0.25 | N | 0.526 | neutral | None | None | None | None | N |
E/T | 0.5701 | likely_pathogenic | 0.5257 | ambiguous | -1.209 | Destabilizing | 0.25 | N | 0.672 | neutral | None | None | None | None | N |
E/V | 0.487 | ambiguous | 0.4796 | ambiguous | -0.385 | Destabilizing | 0.468 | N | 0.711 | prob.delet. | D | 0.633810412 | None | None | N |
E/W | 0.9875 | likely_pathogenic | 0.9878 | pathogenic | -0.566 | Destabilizing | 0.982 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/Y | 0.9293 | likely_pathogenic | 0.9242 | pathogenic | -0.499 | Destabilizing | 0.826 | D | 0.756 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.