Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14254 | 42985;42986;42987 | chr2:178633599;178633598;178633597 | chr2:179498326;179498325;179498324 |
N2AB | 12613 | 38062;38063;38064 | chr2:178633599;178633598;178633597 | chr2:179498326;179498325;179498324 |
N2A | 11686 | 35281;35282;35283 | chr2:178633599;178633598;178633597 | chr2:179498326;179498325;179498324 |
N2B | 5189 | 15790;15791;15792 | chr2:178633599;178633598;178633597 | chr2:179498326;179498325;179498324 |
Novex-1 | 5314 | 16165;16166;16167 | chr2:178633599;178633598;178633597 | chr2:179498326;179498325;179498324 |
Novex-2 | 5381 | 16366;16367;16368 | chr2:178633599;178633598;178633597 | chr2:179498326;179498325;179498324 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | rs1342186371 | None | 0.896 | D | 0.77 | 0.664 | 0.874471701311 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5749 | likely_pathogenic | 0.5945 | pathogenic | -2.414 | Highly Destabilizing | 0.334 | N | 0.568 | neutral | D | 0.530560139 | None | None | N |
V/C | 0.8897 | likely_pathogenic | 0.9098 | pathogenic | -1.825 | Destabilizing | 0.992 | D | 0.752 | deleterious | None | None | None | None | N |
V/D | 0.9585 | likely_pathogenic | 0.9673 | pathogenic | -3.087 | Highly Destabilizing | 0.972 | D | 0.811 | deleterious | None | None | None | None | N |
V/E | 0.9139 | likely_pathogenic | 0.9329 | pathogenic | -2.845 | Highly Destabilizing | 0.896 | D | 0.77 | deleterious | D | 0.760087314 | None | None | N |
V/F | 0.5832 | likely_pathogenic | 0.6833 | pathogenic | -1.305 | Destabilizing | 0.447 | N | 0.737 | prob.delet. | None | None | None | None | N |
V/G | 0.6352 | likely_pathogenic | 0.6682 | pathogenic | -2.923 | Highly Destabilizing | 0.896 | D | 0.769 | deleterious | D | 0.684974353 | None | None | N |
V/H | 0.9729 | likely_pathogenic | 0.9805 | pathogenic | -2.59 | Highly Destabilizing | 0.992 | D | 0.793 | deleterious | None | None | None | None | N |
V/I | 0.1016 | likely_benign | 0.1105 | benign | -0.956 | Destabilizing | 0.127 | N | 0.491 | neutral | None | None | None | None | N |
V/K | 0.9282 | likely_pathogenic | 0.9467 | pathogenic | -1.794 | Destabilizing | 0.766 | D | 0.748 | deleterious | None | None | None | None | N |
V/L | 0.1397 | likely_benign | 0.1791 | benign | -0.956 | Destabilizing | 0.001 | N | 0.23 | neutral | N | 0.456430665 | None | None | N |
V/M | 0.3471 | ambiguous | 0.3865 | ambiguous | -1.157 | Destabilizing | 0.81 | D | 0.665 | neutral | D | 0.646780689 | None | None | N |
V/N | 0.8568 | likely_pathogenic | 0.8854 | pathogenic | -2.217 | Highly Destabilizing | 0.972 | D | 0.811 | deleterious | None | None | None | None | N |
V/P | 0.9512 | likely_pathogenic | 0.9642 | pathogenic | -1.423 | Destabilizing | 0.972 | D | 0.786 | deleterious | None | None | None | None | N |
V/Q | 0.9136 | likely_pathogenic | 0.9353 | pathogenic | -2.004 | Highly Destabilizing | 0.972 | D | 0.789 | deleterious | None | None | None | None | N |
V/R | 0.8953 | likely_pathogenic | 0.9292 | pathogenic | -1.679 | Destabilizing | 0.92 | D | 0.809 | deleterious | None | None | None | None | N |
V/S | 0.8137 | likely_pathogenic | 0.8329 | pathogenic | -2.758 | Highly Destabilizing | 0.766 | D | 0.72 | prob.delet. | None | None | None | None | N |
V/T | 0.5394 | ambiguous | 0.5814 | pathogenic | -2.389 | Highly Destabilizing | 0.617 | D | 0.613 | neutral | None | None | None | None | N |
V/W | 0.9789 | likely_pathogenic | 0.9871 | pathogenic | -1.813 | Destabilizing | 0.992 | D | 0.795 | deleterious | None | None | None | None | N |
V/Y | 0.9145 | likely_pathogenic | 0.9458 | pathogenic | -1.553 | Destabilizing | 0.92 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.