Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14261 | 43006;43007;43008 | chr2:178633578;178633577;178633576 | chr2:179498305;179498304;179498303 |
N2AB | 12620 | 38083;38084;38085 | chr2:178633578;178633577;178633576 | chr2:179498305;179498304;179498303 |
N2A | 11693 | 35302;35303;35304 | chr2:178633578;178633577;178633576 | chr2:179498305;179498304;179498303 |
N2B | 5196 | 15811;15812;15813 | chr2:178633578;178633577;178633576 | chr2:179498305;179498304;179498303 |
Novex-1 | 5321 | 16186;16187;16188 | chr2:178633578;178633577;178633576 | chr2:179498305;179498304;179498303 |
Novex-2 | 5388 | 16387;16388;16389 | chr2:178633578;178633577;178633576 | chr2:179498305;179498304;179498303 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.99 | N | 0.628 | 0.266 | 0.473774312618 | gnomAD-4.0.0 | 1.5923E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85959E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.427 | ambiguous | 0.3428 | ambiguous | -0.701 | Destabilizing | 0.985 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/C | 0.6841 | likely_pathogenic | 0.6269 | pathogenic | -0.608 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
K/D | 0.7477 | likely_pathogenic | 0.6739 | pathogenic | -0.139 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | N |
K/E | 0.2779 | likely_benign | 0.2173 | benign | -0.004 | Destabilizing | 0.997 | D | 0.651 | neutral | N | 0.506167461 | None | None | N |
K/F | 0.8076 | likely_pathogenic | 0.7101 | pathogenic | -0.263 | Destabilizing | 0.996 | D | 0.691 | prob.neutral | None | None | None | None | N |
K/G | 0.5994 | likely_pathogenic | 0.513 | ambiguous | -1.089 | Destabilizing | 0.998 | D | 0.653 | neutral | None | None | None | None | N |
K/H | 0.2826 | likely_benign | 0.2679 | benign | -1.328 | Destabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | N |
K/I | 0.3355 | likely_benign | 0.2453 | benign | 0.314 | Stabilizing | 0.961 | D | 0.648 | neutral | N | 0.512215485 | None | None | N |
K/L | 0.3504 | ambiguous | 0.2808 | benign | 0.314 | Stabilizing | 0.931 | D | 0.641 | neutral | None | None | None | None | N |
K/M | 0.2483 | likely_benign | 0.1914 | benign | 0.122 | Stabilizing | 0.856 | D | 0.406 | neutral | None | None | None | None | N |
K/N | 0.4226 | ambiguous | 0.3373 | benign | -0.559 | Destabilizing | 0.999 | D | 0.629 | neutral | D | 0.585565537 | None | None | N |
K/P | 0.9519 | likely_pathogenic | 0.9346 | pathogenic | 0.005 | Stabilizing | 0.999 | D | 0.668 | neutral | None | None | None | None | N |
K/Q | 0.1422 | likely_benign | 0.1257 | benign | -0.555 | Destabilizing | 0.997 | D | 0.653 | neutral | N | 0.512093164 | None | None | N |
K/R | 0.0977 | likely_benign | 0.0922 | benign | -0.655 | Destabilizing | 0.99 | D | 0.628 | neutral | N | 0.511086878 | None | None | N |
K/S | 0.4248 | ambiguous | 0.3485 | ambiguous | -1.215 | Destabilizing | 0.993 | D | 0.633 | neutral | None | None | None | None | N |
K/T | 0.1574 | likely_benign | 0.1311 | benign | -0.863 | Destabilizing | 0.98 | D | 0.643 | neutral | N | 0.504892292 | None | None | N |
K/V | 0.2977 | likely_benign | 0.2376 | benign | 0.005 | Stabilizing | 0.469 | N | 0.471 | neutral | None | None | None | None | N |
K/W | 0.8306 | likely_pathogenic | 0.7814 | pathogenic | -0.143 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/Y | 0.6958 | likely_pathogenic | 0.598 | pathogenic | 0.117 | Stabilizing | 0.999 | D | 0.686 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.