Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14269 | 43030;43031;43032 | chr2:178633554;178633553;178633552 | chr2:179498281;179498280;179498279 |
N2AB | 12628 | 38107;38108;38109 | chr2:178633554;178633553;178633552 | chr2:179498281;179498280;179498279 |
N2A | 11701 | 35326;35327;35328 | chr2:178633554;178633553;178633552 | chr2:179498281;179498280;179498279 |
N2B | 5204 | 15835;15836;15837 | chr2:178633554;178633553;178633552 | chr2:179498281;179498280;179498279 |
Novex-1 | 5329 | 16210;16211;16212 | chr2:178633554;178633553;178633552 | chr2:179498281;179498280;179498279 |
Novex-2 | 5396 | 16411;16412;16413 | chr2:178633554;178633553;178633552 | chr2:179498281;179498280;179498279 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs778681091 | None | 0.331 | D | 0.665 | 0.188 | 0.1749357433 | gnomAD-4.0.0 | 1.59212E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78118E-05 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs941635511 | None | 0.025 | N | 0.406 | 0.106 | 0.351180957027 | gnomAD-4.0.0 | 4.7906E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 8.11575E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6185 | likely_pathogenic | 0.4217 | ambiguous | -2.315 | Highly Destabilizing | 0.272 | N | 0.628 | neutral | None | None | None | None | N |
I/C | 0.9125 | likely_pathogenic | 0.832 | pathogenic | -1.471 | Destabilizing | 0.968 | D | 0.722 | prob.delet. | None | None | None | None | N |
I/D | 0.9859 | likely_pathogenic | 0.9621 | pathogenic | -3.139 | Highly Destabilizing | 0.89 | D | 0.821 | deleterious | None | None | None | None | N |
I/E | 0.9601 | likely_pathogenic | 0.9035 | pathogenic | -2.869 | Highly Destabilizing | 0.726 | D | 0.815 | deleterious | None | None | None | None | N |
I/F | 0.3861 | ambiguous | 0.2478 | benign | -1.542 | Destabilizing | 0.331 | N | 0.636 | neutral | D | 0.695413167 | None | None | N |
I/G | 0.9474 | likely_pathogenic | 0.8818 | pathogenic | -2.833 | Highly Destabilizing | 0.726 | D | 0.813 | deleterious | None | None | None | None | N |
I/H | 0.9544 | likely_pathogenic | 0.8755 | pathogenic | -2.444 | Highly Destabilizing | 0.968 | D | 0.799 | deleterious | None | None | None | None | N |
I/K | 0.9297 | likely_pathogenic | 0.8286 | pathogenic | -1.879 | Destabilizing | 0.726 | D | 0.809 | deleterious | None | None | None | None | N |
I/L | 0.1054 | likely_benign | 0.0757 | benign | -0.781 | Destabilizing | None | N | 0.205 | neutral | N | 0.460642768 | None | None | N |
I/M | 0.1441 | likely_benign | 0.1012 | benign | -0.717 | Destabilizing | 0.331 | N | 0.665 | neutral | D | 0.609624819 | None | None | N |
I/N | 0.8839 | likely_pathogenic | 0.7483 | pathogenic | -2.453 | Highly Destabilizing | 0.859 | D | 0.825 | deleterious | D | 0.734236651 | None | None | N |
I/P | 0.9749 | likely_pathogenic | 0.9439 | pathogenic | -1.281 | Destabilizing | 0.89 | D | 0.825 | deleterious | None | None | None | None | N |
I/Q | 0.9349 | likely_pathogenic | 0.8432 | pathogenic | -2.226 | Highly Destabilizing | 0.89 | D | 0.821 | deleterious | None | None | None | None | N |
I/R | 0.8923 | likely_pathogenic | 0.7481 | pathogenic | -1.82 | Destabilizing | 0.726 | D | 0.823 | deleterious | None | None | None | None | N |
I/S | 0.8578 | likely_pathogenic | 0.6864 | pathogenic | -2.976 | Highly Destabilizing | 0.667 | D | 0.745 | deleterious | D | 0.711154155 | None | None | N |
I/T | 0.5458 | ambiguous | 0.3012 | benign | -2.558 | Highly Destabilizing | 0.22 | N | 0.677 | prob.neutral | D | 0.728365637 | None | None | N |
I/V | 0.1208 | likely_benign | 0.0972 | benign | -1.281 | Destabilizing | 0.025 | N | 0.406 | neutral | N | 0.51270774 | None | None | N |
I/W | 0.9561 | likely_pathogenic | 0.8905 | pathogenic | -1.958 | Destabilizing | 0.968 | D | 0.786 | deleterious | None | None | None | None | N |
I/Y | 0.8511 | likely_pathogenic | 0.7229 | pathogenic | -1.619 | Destabilizing | 0.726 | D | 0.766 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.