Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14273 | 43042;43043;43044 | chr2:178633542;178633541;178633540 | chr2:179498269;179498268;179498267 |
N2AB | 12632 | 38119;38120;38121 | chr2:178633542;178633541;178633540 | chr2:179498269;179498268;179498267 |
N2A | 11705 | 35338;35339;35340 | chr2:178633542;178633541;178633540 | chr2:179498269;179498268;179498267 |
N2B | 5208 | 15847;15848;15849 | chr2:178633542;178633541;178633540 | chr2:179498269;179498268;179498267 |
Novex-1 | 5333 | 16222;16223;16224 | chr2:178633542;178633541;178633540 | chr2:179498269;179498268;179498267 |
Novex-2 | 5400 | 16423;16424;16425 | chr2:178633542;178633541;178633540 | chr2:179498269;179498268;179498267 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1440872005 | -0.251 | None | N | 0.137 | 0.098 | 0.0401082797425 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/S | rs1440872005 | -0.251 | None | N | 0.137 | 0.098 | 0.0401082797425 | gnomAD-4.0.0 | 1.59217E-06 | None | None | None | None | N | None | 0 | 2.28749E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0583 | likely_benign | 0.0577 | benign | -0.369 | Destabilizing | None | N | 0.126 | neutral | N | 0.442537997 | None | None | N |
P/C | 0.4843 | ambiguous | 0.41 | ambiguous | -0.825 | Destabilizing | 0.245 | N | 0.314 | neutral | None | None | None | None | N |
P/D | 0.1855 | likely_benign | 0.2072 | benign | -0.234 | Destabilizing | 0.009 | N | 0.324 | neutral | None | None | None | None | N |
P/E | 0.1434 | likely_benign | 0.1569 | benign | -0.344 | Destabilizing | 0.009 | N | 0.363 | neutral | None | None | None | None | N |
P/F | 0.4278 | ambiguous | 0.3303 | benign | -0.658 | Destabilizing | 0.074 | N | 0.381 | neutral | None | None | None | None | N |
P/G | 0.1517 | likely_benign | 0.1579 | benign | -0.447 | Destabilizing | 0.004 | N | 0.368 | neutral | None | None | None | None | N |
P/H | 0.1431 | likely_benign | 0.1404 | benign | 0.021 | Stabilizing | 0.196 | N | 0.309 | neutral | N | 0.455824607 | None | None | N |
P/I | 0.2311 | likely_benign | 0.1716 | benign | -0.308 | Destabilizing | 0.022 | N | 0.371 | neutral | None | None | None | None | N |
P/K | 0.1346 | likely_benign | 0.1477 | benign | -0.401 | Destabilizing | None | N | 0.122 | neutral | None | None | None | None | N |
P/L | 0.1168 | likely_benign | 0.0908 | benign | -0.308 | Destabilizing | None | N | 0.192 | neutral | N | 0.449437988 | None | None | N |
P/M | 0.2298 | likely_benign | 0.1874 | benign | -0.55 | Destabilizing | 0.074 | N | 0.309 | neutral | None | None | None | None | N |
P/N | 0.1463 | likely_benign | 0.1374 | benign | -0.234 | Destabilizing | None | N | 0.168 | neutral | None | None | None | None | N |
P/Q | 0.0885 | likely_benign | 0.0935 | benign | -0.431 | Destabilizing | 0.044 | N | 0.336 | neutral | None | None | None | None | N |
P/R | 0.1411 | likely_benign | 0.1462 | benign | 0.062 | Stabilizing | 0.007 | N | 0.28 | neutral | N | 0.438564738 | None | None | N |
P/S | 0.0777 | likely_benign | 0.0692 | benign | -0.576 | Destabilizing | None | N | 0.137 | neutral | N | 0.410252742 | None | None | N |
P/T | 0.0764 | likely_benign | 0.0621 | benign | -0.589 | Destabilizing | None | N | 0.147 | neutral | N | 0.438632891 | None | None | N |
P/V | 0.1539 | likely_benign | 0.1286 | benign | -0.299 | Destabilizing | 0.009 | N | 0.324 | neutral | None | None | None | None | N |
P/W | 0.5739 | likely_pathogenic | 0.5121 | ambiguous | -0.714 | Destabilizing | 0.788 | D | 0.315 | neutral | None | None | None | None | N |
P/Y | 0.369 | ambiguous | 0.3079 | benign | -0.444 | Destabilizing | 0.245 | N | 0.38 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.