Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14274 | 43045;43046;43047 | chr2:178633539;178633538;178633537 | chr2:179498266;179498265;179498264 |
N2AB | 12633 | 38122;38123;38124 | chr2:178633539;178633538;178633537 | chr2:179498266;179498265;179498264 |
N2A | 11706 | 35341;35342;35343 | chr2:178633539;178633538;178633537 | chr2:179498266;179498265;179498264 |
N2B | 5209 | 15850;15851;15852 | chr2:178633539;178633538;178633537 | chr2:179498266;179498265;179498264 |
Novex-1 | 5334 | 16225;16226;16227 | chr2:178633539;178633538;178633537 | chr2:179498266;179498265;179498264 |
Novex-2 | 5401 | 16426;16427;16428 | chr2:178633539;178633538;178633537 | chr2:179498266;179498265;179498264 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs2060064294 | None | 0.001 | N | 0.129 | 0.033 | 0.0401082797425 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/N | rs2060064294 | None | 0.001 | N | 0.129 | 0.033 | 0.0401082797425 | gnomAD-4.0.0 | 6.57384E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4708E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4269 | ambiguous | 0.3009 | benign | -0.71 | Destabilizing | 0.061 | N | 0.251 | neutral | None | None | None | None | N |
K/C | 0.8026 | likely_pathogenic | 0.7188 | pathogenic | -0.618 | Destabilizing | 0.983 | D | 0.387 | neutral | None | None | None | None | N |
K/D | 0.702 | likely_pathogenic | 0.552 | ambiguous | -0.018 | Destabilizing | 0.129 | N | 0.299 | neutral | None | None | None | None | N |
K/E | 0.347 | ambiguous | 0.2199 | benign | 0.13 | Stabilizing | 0.183 | N | 0.207 | neutral | N | 0.511291049 | None | None | N |
K/F | 0.8223 | likely_pathogenic | 0.7335 | pathogenic | -0.302 | Destabilizing | 0.716 | D | 0.473 | neutral | None | None | None | None | N |
K/G | 0.5903 | likely_pathogenic | 0.4287 | ambiguous | -1.103 | Destabilizing | 0.129 | N | 0.251 | neutral | None | None | None | None | N |
K/H | 0.3952 | ambiguous | 0.3321 | benign | -1.379 | Destabilizing | 0.836 | D | 0.342 | neutral | None | None | None | None | N |
K/I | 0.4086 | ambiguous | 0.3035 | benign | 0.327 | Stabilizing | 0.213 | N | 0.409 | neutral | D | 0.533071124 | None | None | N |
K/L | 0.4038 | ambiguous | 0.3214 | benign | 0.327 | Stabilizing | 0.061 | N | 0.241 | neutral | None | None | None | None | N |
K/M | 0.3425 | ambiguous | 0.2515 | benign | 0.132 | Stabilizing | 0.027 | N | 0.221 | neutral | None | None | None | None | N |
K/N | 0.5391 | ambiguous | 0.4033 | ambiguous | -0.564 | Destabilizing | 0.001 | N | 0.129 | neutral | N | 0.446653015 | None | None | N |
K/P | 0.8748 | likely_pathogenic | 0.8057 | pathogenic | 0.011 | Stabilizing | 0.593 | D | 0.417 | neutral | None | None | None | None | N |
K/Q | 0.216 | likely_benign | 0.1607 | benign | -0.519 | Destabilizing | 0.351 | N | 0.211 | neutral | D | 0.533071124 | None | None | N |
K/R | 0.0906 | likely_benign | 0.0807 | benign | -0.639 | Destabilizing | 0.001 | N | 0.121 | neutral | N | 0.419259115 | None | None | N |
K/S | 0.5377 | ambiguous | 0.4025 | ambiguous | -1.243 | Destabilizing | 0.129 | N | 0.155 | neutral | None | None | None | None | N |
K/T | 0.2379 | likely_benign | 0.1712 | benign | -0.869 | Destabilizing | 0.003 | N | 0.165 | neutral | N | 0.449318152 | None | None | N |
K/V | 0.3944 | ambiguous | 0.2949 | benign | 0.011 | Stabilizing | 0.129 | N | 0.28 | neutral | None | None | None | None | N |
K/W | 0.829 | likely_pathogenic | 0.7802 | pathogenic | -0.197 | Destabilizing | 0.983 | D | 0.382 | neutral | None | None | None | None | N |
K/Y | 0.7016 | likely_pathogenic | 0.5965 | pathogenic | 0.086 | Stabilizing | 0.94 | D | 0.421 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.