Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14277 | 43054;43055;43056 | chr2:178633530;178633529;178633528 | chr2:179498257;179498256;179498255 |
N2AB | 12636 | 38131;38132;38133 | chr2:178633530;178633529;178633528 | chr2:179498257;179498256;179498255 |
N2A | 11709 | 35350;35351;35352 | chr2:178633530;178633529;178633528 | chr2:179498257;179498256;179498255 |
N2B | 5212 | 15859;15860;15861 | chr2:178633530;178633529;178633528 | chr2:179498257;179498256;179498255 |
Novex-1 | 5337 | 16234;16235;16236 | chr2:178633530;178633529;178633528 | chr2:179498257;179498256;179498255 |
Novex-2 | 5404 | 16435;16436;16437 | chr2:178633530;178633529;178633528 | chr2:179498257;179498256;179498255 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs397517568 | -1.403 | 0.497 | D | 0.563 | 0.233 | 0.439975540334 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.65E-05 | 8.9E-06 | 0 |
I/F | rs397517568 | -1.403 | 0.497 | D | 0.563 | 0.233 | 0.439975540334 | gnomAD-4.0.0 | 7.52811E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.87413E-05 | 0 | 8.99596E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.562 | ambiguous | 0.4352 | ambiguous | -2.0 | Highly Destabilizing | 0.072 | N | 0.59 | neutral | None | None | None | None | N |
I/C | 0.7916 | likely_pathogenic | 0.7336 | pathogenic | -1.225 | Destabilizing | 0.909 | D | 0.634 | neutral | None | None | None | None | N |
I/D | 0.9234 | likely_pathogenic | 0.8815 | pathogenic | -1.633 | Destabilizing | 0.726 | D | 0.721 | prob.delet. | None | None | None | None | N |
I/E | 0.7756 | likely_pathogenic | 0.6914 | pathogenic | -1.486 | Destabilizing | 0.726 | D | 0.717 | prob.delet. | None | None | None | None | N |
I/F | 0.1876 | likely_benign | 0.1605 | benign | -1.168 | Destabilizing | 0.497 | N | 0.563 | neutral | D | 0.534460936 | None | None | N |
I/G | 0.8304 | likely_pathogenic | 0.7437 | pathogenic | -2.465 | Highly Destabilizing | 0.726 | D | 0.713 | prob.delet. | None | None | None | None | N |
I/H | 0.743 | likely_pathogenic | 0.6865 | pathogenic | -1.717 | Destabilizing | 0.968 | D | 0.721 | prob.delet. | None | None | None | None | N |
I/K | 0.6691 | likely_pathogenic | 0.5678 | pathogenic | -1.434 | Destabilizing | 0.726 | D | 0.717 | prob.delet. | None | None | None | None | N |
I/L | 0.1286 | likely_benign | 0.1114 | benign | -0.714 | Destabilizing | 0.009 | N | 0.336 | neutral | N | 0.511965635 | None | None | N |
I/M | 0.1067 | likely_benign | 0.0967 | benign | -0.601 | Destabilizing | 0.055 | N | 0.387 | neutral | N | 0.514793076 | None | None | N |
I/N | 0.6179 | likely_pathogenic | 0.5023 | ambiguous | -1.532 | Destabilizing | 0.859 | D | 0.73 | prob.delet. | D | 0.744178603 | None | None | N |
I/P | 0.9249 | likely_pathogenic | 0.8829 | pathogenic | -1.117 | Destabilizing | 0.89 | D | 0.728 | prob.delet. | None | None | None | None | N |
I/Q | 0.6214 | likely_pathogenic | 0.549 | ambiguous | -1.496 | Destabilizing | 0.726 | D | 0.729 | prob.delet. | None | None | None | None | N |
I/R | 0.5886 | likely_pathogenic | 0.4701 | ambiguous | -1.067 | Destabilizing | 0.726 | D | 0.73 | prob.delet. | None | None | None | None | N |
I/S | 0.5625 | ambiguous | 0.4478 | ambiguous | -2.24 | Highly Destabilizing | 0.497 | N | 0.648 | neutral | D | 0.660993695 | None | None | N |
I/T | 0.4955 | ambiguous | 0.3688 | ambiguous | -1.951 | Destabilizing | 0.124 | N | 0.608 | neutral | D | 0.613560662 | None | None | N |
I/V | 0.0898 | likely_benign | 0.0766 | benign | -1.117 | Destabilizing | None | N | 0.181 | neutral | D | 0.525720041 | None | None | N |
I/W | 0.8382 | likely_pathogenic | 0.8098 | pathogenic | -1.407 | Destabilizing | 0.968 | D | 0.737 | prob.delet. | None | None | None | None | N |
I/Y | 0.6006 | likely_pathogenic | 0.5398 | ambiguous | -1.115 | Destabilizing | 0.726 | D | 0.651 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.