Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14282 | 43069;43070;43071 | chr2:178633515;178633514;178633513 | chr2:179498242;179498241;179498240 |
N2AB | 12641 | 38146;38147;38148 | chr2:178633515;178633514;178633513 | chr2:179498242;179498241;179498240 |
N2A | 11714 | 35365;35366;35367 | chr2:178633515;178633514;178633513 | chr2:179498242;179498241;179498240 |
N2B | 5217 | 15874;15875;15876 | chr2:178633515;178633514;178633513 | chr2:179498242;179498241;179498240 |
Novex-1 | 5342 | 16249;16250;16251 | chr2:178633515;178633514;178633513 | chr2:179498242;179498241;179498240 |
Novex-2 | 5409 | 16450;16451;16452 | chr2:178633515;178633514;178633513 | chr2:179498242;179498241;179498240 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.891 | N | 0.309 | 0.099 | 0.403040389579 | gnomAD-4.0.0 | 3.1844E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86558E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1935 | likely_benign | 0.209 | benign | -1.385 | Destabilizing | 0.688 | D | 0.347 | neutral | None | None | None | None | N |
L/C | 0.4818 | ambiguous | 0.5039 | ambiguous | -0.76 | Destabilizing | 0.998 | D | 0.449 | neutral | None | None | None | None | N |
L/D | 0.5592 | ambiguous | 0.5967 | pathogenic | -0.913 | Destabilizing | 0.949 | D | 0.497 | neutral | None | None | None | None | N |
L/E | 0.2954 | likely_benign | 0.3313 | benign | -0.979 | Destabilizing | 0.728 | D | 0.482 | neutral | None | None | None | None | N |
L/F | 0.1348 | likely_benign | 0.1386 | benign | -1.217 | Destabilizing | 0.991 | D | 0.427 | neutral | None | None | None | None | N |
L/G | 0.3562 | ambiguous | 0.3871 | ambiguous | -1.627 | Destabilizing | 0.842 | D | 0.483 | neutral | None | None | None | None | N |
L/H | 0.1703 | likely_benign | 0.1869 | benign | -0.837 | Destabilizing | 0.993 | D | 0.502 | neutral | None | None | None | None | N |
L/I | 0.1075 | likely_benign | 0.106 | benign | -0.828 | Destabilizing | 0.915 | D | 0.357 | neutral | None | None | None | None | N |
L/K | 0.1166 | likely_benign | 0.1391 | benign | -0.776 | Destabilizing | 0.007 | N | 0.261 | neutral | None | None | None | None | N |
L/M | 0.122 | likely_benign | 0.1145 | benign | -0.514 | Destabilizing | 0.989 | D | 0.447 | neutral | N | 0.511224395 | None | None | N |
L/N | 0.2022 | likely_benign | 0.2202 | benign | -0.497 | Destabilizing | 0.949 | D | 0.495 | neutral | None | None | None | None | N |
L/P | 0.1979 | likely_benign | 0.2445 | benign | -0.982 | Destabilizing | 0.966 | D | 0.525 | neutral | N | 0.466667583 | None | None | N |
L/Q | 0.0985 | likely_benign | 0.1143 | benign | -0.798 | Destabilizing | 0.934 | D | 0.484 | neutral | N | 0.485538001 | None | None | N |
L/R | 0.1177 | likely_benign | 0.1419 | benign | -0.11 | Destabilizing | 0.012 | N | 0.351 | neutral | N | 0.454582937 | None | None | N |
L/S | 0.1679 | likely_benign | 0.1791 | benign | -1.04 | Destabilizing | 0.842 | D | 0.445 | neutral | None | None | None | None | N |
L/T | 0.1507 | likely_benign | 0.1572 | benign | -1.001 | Destabilizing | 0.842 | D | 0.384 | neutral | None | None | None | None | N |
L/V | 0.1103 | likely_benign | 0.115 | benign | -0.982 | Destabilizing | 0.891 | D | 0.309 | neutral | N | 0.485117775 | None | None | N |
L/W | 0.227 | likely_benign | 0.2496 | benign | -1.201 | Destabilizing | 0.998 | D | 0.552 | neutral | None | None | None | None | N |
L/Y | 0.2845 | likely_benign | 0.2965 | benign | -0.977 | Destabilizing | 0.991 | D | 0.443 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.