Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14294 | 43105;43106;43107 | chr2:178633479;178633478;178633477 | chr2:179498206;179498205;179498204 |
N2AB | 12653 | 38182;38183;38184 | chr2:178633479;178633478;178633477 | chr2:179498206;179498205;179498204 |
N2A | 11726 | 35401;35402;35403 | chr2:178633479;178633478;178633477 | chr2:179498206;179498205;179498204 |
N2B | 5229 | 15910;15911;15912 | chr2:178633479;178633478;178633477 | chr2:179498206;179498205;179498204 |
Novex-1 | 5354 | 16285;16286;16287 | chr2:178633479;178633478;178633477 | chr2:179498206;179498205;179498204 |
Novex-2 | 5421 | 16486;16487;16488 | chr2:178633479;178633478;178633477 | chr2:179498206;179498205;179498204 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.549 | N | 0.362 | 0.071 | 0.154104182512 | gnomAD-4.0.0 | 3.18461E-06 | None | None | None | None | N | None | 0 | 4.57561E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1366 | likely_benign | 0.1541 | benign | 0.056 | Stabilizing | 0.002 | N | 0.206 | neutral | None | None | None | None | N |
K/C | 0.5962 | likely_pathogenic | 0.5948 | pathogenic | -0.117 | Destabilizing | 0.977 | D | 0.321 | neutral | None | None | None | None | N |
K/D | 0.2686 | likely_benign | 0.3192 | benign | -0.045 | Destabilizing | 0.447 | N | 0.4 | neutral | None | None | None | None | N |
K/E | 0.1188 | likely_benign | 0.1234 | benign | -0.052 | Destabilizing | 0.549 | D | 0.312 | neutral | N | 0.401700593 | None | None | N |
K/F | 0.6068 | likely_pathogenic | 0.5848 | pathogenic | -0.231 | Destabilizing | 0.92 | D | 0.316 | neutral | None | None | None | None | N |
K/G | 0.1739 | likely_benign | 0.2058 | benign | -0.112 | Destabilizing | 0.005 | N | 0.249 | neutral | None | None | None | None | N |
K/H | 0.2146 | likely_benign | 0.2436 | benign | -0.357 | Destabilizing | 0.92 | D | 0.306 | neutral | None | None | None | None | N |
K/I | 0.2414 | likely_benign | 0.2355 | benign | 0.417 | Stabilizing | 0.81 | D | 0.342 | neutral | N | 0.466415441 | None | None | N |
K/L | 0.2088 | likely_benign | 0.2263 | benign | 0.417 | Stabilizing | 0.447 | N | 0.409 | neutral | None | None | None | None | N |
K/M | 0.1621 | likely_benign | 0.163 | benign | 0.202 | Stabilizing | 0.992 | D | 0.307 | neutral | None | None | None | None | N |
K/N | 0.1811 | likely_benign | 0.1977 | benign | 0.321 | Stabilizing | 0.016 | N | 0.239 | neutral | N | 0.448945682 | None | None | N |
K/P | 0.4007 | ambiguous | 0.4179 | ambiguous | 0.323 | Stabilizing | 0.92 | D | 0.33 | neutral | None | None | None | None | N |
K/Q | 0.1013 | likely_benign | 0.1106 | benign | 0.144 | Stabilizing | 0.896 | D | 0.321 | neutral | N | 0.448943707 | None | None | N |
K/R | 0.0961 | likely_benign | 0.0936 | benign | 0.048 | Stabilizing | 0.549 | D | 0.362 | neutral | N | 0.472341142 | None | None | N |
K/S | 0.1625 | likely_benign | 0.1748 | benign | -0.108 | Destabilizing | 0.021 | N | 0.257 | neutral | None | None | None | None | N |
K/T | 0.0938 | likely_benign | 0.1018 | benign | 0.019 | Stabilizing | 0.379 | N | 0.385 | neutral | N | 0.447751373 | None | None | N |
K/V | 0.2167 | likely_benign | 0.2282 | benign | 0.323 | Stabilizing | 0.447 | N | 0.393 | neutral | None | None | None | None | N |
K/W | 0.6574 | likely_pathogenic | 0.6406 | pathogenic | -0.289 | Destabilizing | 0.992 | D | 0.437 | neutral | None | None | None | None | N |
K/Y | 0.4937 | ambiguous | 0.4799 | ambiguous | 0.073 | Stabilizing | 0.972 | D | 0.318 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.