Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14298 | 43117;43118;43119 | chr2:178633467;178633466;178633465 | chr2:179498194;179498193;179498192 |
N2AB | 12657 | 38194;38195;38196 | chr2:178633467;178633466;178633465 | chr2:179498194;179498193;179498192 |
N2A | 11730 | 35413;35414;35415 | chr2:178633467;178633466;178633465 | chr2:179498194;179498193;179498192 |
N2B | 5233 | 15922;15923;15924 | chr2:178633467;178633466;178633465 | chr2:179498194;179498193;179498192 |
Novex-1 | 5358 | 16297;16298;16299 | chr2:178633467;178633466;178633465 | chr2:179498194;179498193;179498192 |
Novex-2 | 5425 | 16498;16499;16500 | chr2:178633467;178633466;178633465 | chr2:179498194;179498193;179498192 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs778634417 | -0.389 | 0.198 | D | 0.499 | 0.238 | None | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 1.12183E-04 | None | 0 | None | 0 | 8.88E-06 | 0 |
E/K | rs778634417 | -0.389 | 0.198 | D | 0.499 | 0.238 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 1.93274E-04 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs778634417 | -0.389 | 0.198 | D | 0.499 | 0.238 | None | gnomAD-4.0.0 | 1.05379E-05 | None | None | None | None | N | None | 2.67073E-05 | 0 | None | 0 | 6.70391E-05 | None | 0 | 0 | 9.32524E-06 | 0 | 1.60205E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1426 | likely_benign | 0.1275 | benign | -0.855 | Destabilizing | 0.042 | N | 0.49 | neutral | N | 0.504769058 | None | None | N |
E/C | 0.7794 | likely_pathogenic | 0.7608 | pathogenic | -0.415 | Destabilizing | 0.958 | D | 0.592 | neutral | None | None | None | None | N |
E/D | 0.1078 | likely_benign | 0.1015 | benign | -1.25 | Destabilizing | 0.001 | N | 0.174 | neutral | N | 0.51273392 | None | None | N |
E/F | 0.5732 | likely_pathogenic | 0.5397 | ambiguous | -0.555 | Destabilizing | 0.497 | N | 0.605 | neutral | None | None | None | None | N |
E/G | 0.2103 | likely_benign | 0.165 | benign | -1.208 | Destabilizing | 0.096 | N | 0.535 | neutral | D | 0.717472022 | None | None | N |
E/H | 0.4143 | ambiguous | 0.3774 | ambiguous | -0.901 | Destabilizing | 0.667 | D | 0.574 | neutral | None | None | None | None | N |
E/I | 0.197 | likely_benign | 0.1773 | benign | 0.102 | Stabilizing | 0.124 | N | 0.54 | neutral | None | None | None | None | N |
E/K | 0.1823 | likely_benign | 0.1249 | benign | -0.645 | Destabilizing | 0.198 | N | 0.499 | neutral | D | 0.529246298 | None | None | N |
E/L | 0.279 | likely_benign | 0.2647 | benign | 0.102 | Stabilizing | 0.001 | N | 0.409 | neutral | None | None | None | None | N |
E/M | 0.3307 | likely_benign | 0.2946 | benign | 0.631 | Stabilizing | 0.497 | N | 0.588 | neutral | None | None | None | None | N |
E/N | 0.1447 | likely_benign | 0.1406 | benign | -1.052 | Destabilizing | 0.001 | N | 0.291 | neutral | None | None | None | None | N |
E/P | 0.548 | ambiguous | 0.6041 | pathogenic | -0.195 | Destabilizing | 0.667 | D | 0.61 | neutral | None | None | None | None | N |
E/Q | 0.148 | likely_benign | 0.1272 | benign | -0.934 | Destabilizing | 0.021 | N | 0.176 | neutral | N | 0.505261399 | None | None | N |
E/R | 0.3007 | likely_benign | 0.2369 | benign | -0.466 | Destabilizing | 0.22 | N | 0.522 | neutral | None | None | None | None | N |
E/S | 0.1586 | likely_benign | 0.1456 | benign | -1.363 | Destabilizing | 0.055 | N | 0.499 | neutral | None | None | None | None | N |
E/T | 0.1499 | likely_benign | 0.1371 | benign | -1.071 | Destabilizing | 0.22 | N | 0.536 | neutral | None | None | None | None | N |
E/V | 0.137 | likely_benign | 0.1269 | benign | -0.195 | Destabilizing | 0.001 | N | 0.405 | neutral | N | 0.501537122 | None | None | N |
E/W | 0.8436 | likely_pathogenic | 0.8024 | pathogenic | -0.392 | Destabilizing | 0.958 | D | 0.603 | neutral | None | None | None | None | N |
E/Y | 0.5121 | ambiguous | 0.4626 | ambiguous | -0.321 | Destabilizing | 0.859 | D | 0.605 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.