Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14304 | 43135;43136;43137 | chr2:178633449;178633448;178633447 | chr2:179498176;179498175;179498174 |
N2AB | 12663 | 38212;38213;38214 | chr2:178633449;178633448;178633447 | chr2:179498176;179498175;179498174 |
N2A | 11736 | 35431;35432;35433 | chr2:178633449;178633448;178633447 | chr2:179498176;179498175;179498174 |
N2B | 5239 | 15940;15941;15942 | chr2:178633449;178633448;178633447 | chr2:179498176;179498175;179498174 |
Novex-1 | 5364 | 16315;16316;16317 | chr2:178633449;178633448;178633447 | chr2:179498176;179498175;179498174 |
Novex-2 | 5431 | 16516;16517;16518 | chr2:178633449;178633448;178633447 | chr2:179498176;179498175;179498174 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | None | None | 0.997 | D | 0.77 | 0.434 | 0.348324211639 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2719 | likely_benign | 0.2208 | benign | -0.225 | Destabilizing | 0.977 | D | 0.598 | neutral | D | 0.621102892 | None | None | N |
G/C | 0.5633 | ambiguous | 0.4828 | ambiguous | -0.76 | Destabilizing | 1.0 | D | 0.787 | deleterious | D | 0.764499249 | None | None | N |
G/D | 0.3653 | ambiguous | 0.3032 | benign | -0.931 | Destabilizing | 0.997 | D | 0.77 | deleterious | D | 0.613997016 | None | None | N |
G/E | 0.3531 | ambiguous | 0.2879 | benign | -1.107 | Destabilizing | 0.995 | D | 0.729 | prob.delet. | None | None | None | None | N |
G/F | 0.8067 | likely_pathogenic | 0.742 | pathogenic | -1.06 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
G/H | 0.5864 | likely_pathogenic | 0.5148 | ambiguous | -0.464 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
G/I | 0.5588 | ambiguous | 0.4605 | ambiguous | -0.429 | Destabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | N |
G/K | 0.5053 | ambiguous | 0.4027 | ambiguous | -0.842 | Destabilizing | 0.635 | D | 0.515 | neutral | None | None | None | None | N |
G/L | 0.6137 | likely_pathogenic | 0.5281 | ambiguous | -0.429 | Destabilizing | 0.995 | D | 0.746 | deleterious | None | None | None | None | N |
G/M | 0.7151 | likely_pathogenic | 0.6305 | pathogenic | -0.416 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
G/N | 0.433 | ambiguous | 0.3451 | ambiguous | -0.412 | Destabilizing | 0.995 | D | 0.813 | deleterious | None | None | None | None | N |
G/P | 0.9334 | likely_pathogenic | 0.9231 | pathogenic | -0.33 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
G/Q | 0.4105 | ambiguous | 0.3426 | ambiguous | -0.752 | Destabilizing | 0.995 | D | 0.779 | deleterious | None | None | None | None | N |
G/R | 0.3639 | ambiguous | 0.3102 | benign | -0.316 | Destabilizing | 0.413 | N | 0.561 | neutral | D | 0.622022145 | None | None | N |
G/S | 0.1684 | likely_benign | 0.1442 | benign | -0.476 | Destabilizing | 0.993 | D | 0.773 | deleterious | D | 0.60641641 | None | None | N |
G/T | 0.4155 | ambiguous | 0.3323 | benign | -0.599 | Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
G/V | 0.4661 | ambiguous | 0.379 | ambiguous | -0.33 | Destabilizing | 0.997 | D | 0.753 | deleterious | D | 0.654228431 | None | None | N |
G/W | 0.7677 | likely_pathogenic | 0.7225 | pathogenic | -1.203 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
G/Y | 0.7402 | likely_pathogenic | 0.666 | pathogenic | -0.864 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.