Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14305 | 43138;43139;43140 | chr2:178633446;178633445;178633444 | chr2:179498173;179498172;179498171 |
N2AB | 12664 | 38215;38216;38217 | chr2:178633446;178633445;178633444 | chr2:179498173;179498172;179498171 |
N2A | 11737 | 35434;35435;35436 | chr2:178633446;178633445;178633444 | chr2:179498173;179498172;179498171 |
N2B | 5240 | 15943;15944;15945 | chr2:178633446;178633445;178633444 | chr2:179498173;179498172;179498171 |
Novex-1 | 5365 | 16318;16319;16320 | chr2:178633446;178633445;178633444 | chr2:179498173;179498172;179498171 |
Novex-2 | 5432 | 16519;16520;16521 | chr2:178633446;178633445;178633444 | chr2:179498173;179498172;179498171 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 1.0 | D | 0.735 | 0.475 | 0.640098834198 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1448 | likely_benign | 0.1145 | benign | -0.276 | Destabilizing | 0.999 | D | 0.555 | neutral | N | 0.503359503 | None | None | N |
T/C | 0.7584 | likely_pathogenic | 0.6491 | pathogenic | -0.196 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
T/D | 0.4841 | ambiguous | 0.4013 | ambiguous | 0.064 | Stabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
T/E | 0.4187 | ambiguous | 0.3307 | benign | -0.016 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
T/F | 0.4431 | ambiguous | 0.3304 | benign | -0.783 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
T/G | 0.3641 | ambiguous | 0.2942 | benign | -0.399 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
T/H | 0.4346 | ambiguous | 0.3476 | ambiguous | -0.661 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
T/I | 0.3635 | ambiguous | 0.2337 | benign | -0.071 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | D | 0.607530484 | None | None | N |
T/K | 0.2771 | likely_benign | 0.2142 | benign | -0.347 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | N | 0.508759757 | None | None | N |
T/L | 0.2111 | likely_benign | 0.1532 | benign | -0.071 | Destabilizing | 0.999 | D | 0.675 | neutral | None | None | None | None | N |
T/M | 0.1448 | likely_benign | 0.1173 | benign | 0.069 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
T/N | 0.1689 | likely_benign | 0.1333 | benign | -0.098 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
T/P | 0.2529 | likely_benign | 0.2404 | benign | -0.111 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | D | 0.547728382 | None | None | N |
T/Q | 0.3486 | ambiguous | 0.2823 | benign | -0.334 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
T/R | 0.2466 | likely_benign | 0.2043 | benign | -0.043 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | N | 0.510757044 | None | None | N |
T/S | 0.1557 | likely_benign | 0.1342 | benign | -0.286 | Destabilizing | 0.999 | D | 0.585 | neutral | N | 0.485117775 | None | None | N |
T/V | 0.3154 | likely_benign | 0.2158 | benign | -0.111 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
T/W | 0.7896 | likely_pathogenic | 0.7361 | pathogenic | -0.814 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
T/Y | 0.5178 | ambiguous | 0.4037 | ambiguous | -0.523 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.