Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14306 | 43141;43142;43143 | chr2:178633443;178633442;178633441 | chr2:179498170;179498169;179498168 |
N2AB | 12665 | 38218;38219;38220 | chr2:178633443;178633442;178633441 | chr2:179498170;179498169;179498168 |
N2A | 11738 | 35437;35438;35439 | chr2:178633443;178633442;178633441 | chr2:179498170;179498169;179498168 |
N2B | 5241 | 15946;15947;15948 | chr2:178633443;178633442;178633441 | chr2:179498170;179498169;179498168 |
Novex-1 | 5366 | 16321;16322;16323 | chr2:178633443;178633442;178633441 | chr2:179498170;179498169;179498168 |
Novex-2 | 5433 | 16522;16523;16524 | chr2:178633443;178633442;178633441 | chr2:179498170;179498169;179498168 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs537375897 | -0.342 | 1.0 | N | 0.477 | 0.201 | 0.326616659874 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
D/E | rs537375897 | -0.342 | 1.0 | N | 0.477 | 0.201 | 0.326616659874 | gnomAD-4.0.0 | 2.73759E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99617E-07 | 3.47866E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5007 | ambiguous | 0.309 | benign | -0.628 | Destabilizing | 1.0 | D | 0.756 | deleterious | N | 0.505953922 | None | None | N |
D/C | 0.9361 | likely_pathogenic | 0.854 | pathogenic | -0.266 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
D/E | 0.4514 | ambiguous | 0.3211 | benign | -0.782 | Destabilizing | 1.0 | D | 0.477 | neutral | N | 0.507610107 | None | None | N |
D/F | 0.9183 | likely_pathogenic | 0.8433 | pathogenic | -0.38 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
D/G | 0.5111 | ambiguous | 0.3688 | ambiguous | -0.982 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | D | 0.552761374 | None | None | N |
D/H | 0.7401 | likely_pathogenic | 0.6162 | pathogenic | -0.779 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | D | 0.685051691 | None | None | N |
D/I | 0.867 | likely_pathogenic | 0.7155 | pathogenic | 0.307 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
D/K | 0.8479 | likely_pathogenic | 0.7314 | pathogenic | -0.547 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
D/L | 0.8524 | likely_pathogenic | 0.7336 | pathogenic | 0.307 | Stabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
D/M | 0.9389 | likely_pathogenic | 0.8714 | pathogenic | 0.814 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
D/N | 0.2277 | likely_benign | 0.1606 | benign | -0.909 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | D | 0.55275671 | None | None | N |
D/P | 0.9842 | likely_pathogenic | 0.9776 | pathogenic | 0.02 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
D/Q | 0.7613 | likely_pathogenic | 0.6322 | pathogenic | -0.77 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
D/R | 0.8625 | likely_pathogenic | 0.7765 | pathogenic | -0.444 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
D/S | 0.3187 | likely_benign | 0.2135 | benign | -1.198 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
D/T | 0.6751 | likely_pathogenic | 0.4848 | ambiguous | -0.91 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
D/V | 0.6712 | likely_pathogenic | 0.4618 | ambiguous | 0.02 | Stabilizing | 1.0 | D | 0.779 | deleterious | N | 0.503309007 | None | None | N |
D/W | 0.9867 | likely_pathogenic | 0.9775 | pathogenic | -0.26 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
D/Y | 0.6739 | likely_pathogenic | 0.5148 | ambiguous | -0.159 | Destabilizing | 1.0 | D | 0.755 | deleterious | D | 0.646431924 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.