Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14307 | 43144;43145;43146 | chr2:178633440;178633439;178633438 | chr2:179498167;179498166;179498165 |
N2AB | 12666 | 38221;38222;38223 | chr2:178633440;178633439;178633438 | chr2:179498167;179498166;179498165 |
N2A | 11739 | 35440;35441;35442 | chr2:178633440;178633439;178633438 | chr2:179498167;179498166;179498165 |
N2B | 5242 | 15949;15950;15951 | chr2:178633440;178633439;178633438 | chr2:179498167;179498166;179498165 |
Novex-1 | 5367 | 16324;16325;16326 | chr2:178633440;178633439;178633438 | chr2:179498167;179498166;179498165 |
Novex-2 | 5434 | 16525;16526;16527 | chr2:178633440;178633439;178633438 | chr2:179498167;179498166;179498165 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | None | N | 0.245 | 0.173 | 0.166414681773 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1579 | likely_benign | 0.154 | benign | -0.739 | Destabilizing | 0.035 | N | 0.488 | neutral | None | None | None | None | N |
K/C | 0.57 | likely_pathogenic | 0.5523 | ambiguous | -0.62 | Destabilizing | 0.824 | D | 0.515 | neutral | None | None | None | None | N |
K/D | 0.4466 | ambiguous | 0.4305 | ambiguous | -0.17 | Destabilizing | 0.149 | N | 0.561 | neutral | None | None | None | None | N |
K/E | 0.1056 | likely_benign | 0.0998 | benign | -0.041 | Destabilizing | 0.062 | N | 0.569 | neutral | N | 0.502526981 | None | None | N |
K/F | 0.5501 | ambiguous | 0.5271 | ambiguous | -0.384 | Destabilizing | 0.38 | N | 0.549 | neutral | None | None | None | None | N |
K/G | 0.3363 | likely_benign | 0.3318 | benign | -1.126 | Destabilizing | 0.149 | N | 0.535 | neutral | None | None | None | None | N |
K/H | 0.2349 | likely_benign | 0.2318 | benign | -1.472 | Destabilizing | 0.38 | N | 0.558 | neutral | None | None | None | None | N |
K/I | 0.1661 | likely_benign | 0.1482 | benign | 0.274 | Stabilizing | 0.096 | N | 0.572 | neutral | None | None | None | None | N |
K/L | 0.1898 | likely_benign | 0.1864 | benign | 0.274 | Stabilizing | 0.081 | N | 0.533 | neutral | None | None | None | None | N |
K/M | 0.1086 | likely_benign | 0.1066 | benign | 0.189 | Stabilizing | 0.317 | N | 0.567 | neutral | D | 0.600053003 | None | None | N |
K/N | 0.2023 | likely_benign | 0.1974 | benign | -0.563 | Destabilizing | 0.117 | N | 0.575 | neutral | D | 0.575708036 | None | None | N |
K/P | 0.7388 | likely_pathogenic | 0.7569 | pathogenic | -0.034 | Destabilizing | 0.555 | D | 0.607 | neutral | None | None | None | None | N |
K/Q | 0.0865 | likely_benign | 0.0863 | benign | -0.586 | Destabilizing | 0.001 | N | 0.283 | neutral | N | 0.508941464 | None | None | N |
K/R | 0.0865 | likely_benign | 0.0851 | benign | -0.687 | Destabilizing | None | N | 0.287 | neutral | N | 0.514708636 | None | None | N |
K/S | 0.1855 | likely_benign | 0.1841 | benign | -1.24 | Destabilizing | 0.007 | N | 0.268 | neutral | None | None | None | None | N |
K/T | 0.0522 | likely_benign | 0.0516 | benign | -0.89 | Destabilizing | None | N | 0.245 | neutral | N | 0.50391117 | None | None | N |
K/V | 0.163 | likely_benign | 0.1478 | benign | -0.034 | Destabilizing | 0.001 | N | 0.367 | neutral | None | None | None | None | N |
K/W | 0.6989 | likely_pathogenic | 0.7114 | pathogenic | -0.254 | Destabilizing | 0.935 | D | 0.567 | neutral | None | None | None | None | N |
K/Y | 0.459 | ambiguous | 0.4305 | ambiguous | 0.026 | Stabilizing | 0.555 | D | 0.549 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.