Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14309 | 43150;43151;43152 | chr2:178633434;178633433;178633432 | chr2:179498161;179498160;179498159 |
N2AB | 12668 | 38227;38228;38229 | chr2:178633434;178633433;178633432 | chr2:179498161;179498160;179498159 |
N2A | 11741 | 35446;35447;35448 | chr2:178633434;178633433;178633432 | chr2:179498161;179498160;179498159 |
N2B | 5244 | 15955;15956;15957 | chr2:178633434;178633433;178633432 | chr2:179498161;179498160;179498159 |
Novex-1 | 5369 | 16330;16331;16332 | chr2:178633434;178633433;178633432 | chr2:179498161;179498160;179498159 |
Novex-2 | 5436 | 16531;16532;16533 | chr2:178633434;178633433;178633432 | chr2:179498161;179498160;179498159 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs908530219 | 0.431 | 0.101 | N | 0.515 | 0.108 | 0.229924730088 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
K/E | rs908530219 | 0.431 | 0.101 | N | 0.515 | 0.108 | 0.229924730088 | gnomAD-4.0.0 | 7.9614E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.42989E-05 | 0 | 0 |
K/R | None | None | 0.213 | N | 0.496 | 0.095 | 0.274366138417 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 1.94099E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1554 | likely_benign | 0.1625 | benign | -0.325 | Destabilizing | 0.129 | N | 0.448 | neutral | None | None | None | None | N |
K/C | 0.59 | likely_pathogenic | 0.555 | ambiguous | -0.412 | Destabilizing | 0.983 | D | 0.529 | neutral | None | None | None | None | N |
K/D | 0.4418 | ambiguous | 0.4242 | ambiguous | 0.043 | Stabilizing | 0.129 | N | 0.511 | neutral | None | None | None | None | N |
K/E | 0.1122 | likely_benign | 0.1148 | benign | 0.108 | Stabilizing | 0.101 | N | 0.515 | neutral | N | 0.46800203 | None | None | N |
K/F | 0.5662 | likely_pathogenic | 0.5246 | ambiguous | -0.184 | Destabilizing | 0.836 | D | 0.536 | neutral | None | None | None | None | N |
K/G | 0.3379 | likely_benign | 0.3122 | benign | -0.636 | Destabilizing | 0.129 | N | 0.496 | neutral | None | None | None | None | N |
K/H | 0.2288 | likely_benign | 0.2333 | benign | -0.968 | Destabilizing | 0.716 | D | 0.553 | neutral | None | None | None | None | N |
K/I | 0.1599 | likely_benign | 0.1611 | benign | 0.449 | Stabilizing | 0.716 | D | 0.575 | neutral | None | None | None | None | N |
K/L | 0.2135 | likely_benign | 0.2107 | benign | 0.449 | Stabilizing | 0.264 | N | 0.531 | neutral | None | None | None | None | N |
K/M | 0.1214 | likely_benign | 0.1238 | benign | 0.283 | Stabilizing | 0.794 | D | 0.552 | neutral | N | 0.508646526 | None | None | N |
K/N | 0.2343 | likely_benign | 0.2265 | benign | -0.171 | Destabilizing | 0.001 | N | 0.245 | neutral | N | 0.493966388 | None | None | N |
K/P | 0.7831 | likely_pathogenic | 0.7599 | pathogenic | 0.222 | Stabilizing | 0.593 | D | 0.579 | neutral | None | None | None | None | N |
K/Q | 0.1053 | likely_benign | 0.1129 | benign | -0.304 | Destabilizing | 0.007 | N | 0.301 | neutral | N | 0.503632552 | None | None | N |
K/R | 0.0894 | likely_benign | 0.0873 | benign | -0.421 | Destabilizing | 0.213 | N | 0.496 | neutral | N | 0.513213673 | None | None | N |
K/S | 0.1871 | likely_benign | 0.1867 | benign | -0.782 | Destabilizing | 0.004 | N | 0.253 | neutral | None | None | None | None | N |
K/T | 0.0672 | likely_benign | 0.071 | benign | -0.532 | Destabilizing | 0.003 | N | 0.336 | neutral | N | 0.42605405 | None | None | N |
K/V | 0.1378 | likely_benign | 0.1479 | benign | 0.222 | Stabilizing | 0.264 | N | 0.547 | neutral | None | None | None | None | N |
K/W | 0.7208 | likely_pathogenic | 0.6852 | pathogenic | -0.084 | Destabilizing | 0.983 | D | 0.554 | neutral | None | None | None | None | N |
K/Y | 0.4884 | ambiguous | 0.4507 | ambiguous | 0.216 | Stabilizing | 0.836 | D | 0.533 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.