Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14312 | 43159;43160;43161 | chr2:178633425;178633424;178633423 | chr2:179498152;179498151;179498150 |
N2AB | 12671 | 38236;38237;38238 | chr2:178633425;178633424;178633423 | chr2:179498152;179498151;179498150 |
N2A | 11744 | 35455;35456;35457 | chr2:178633425;178633424;178633423 | chr2:179498152;179498151;179498150 |
N2B | 5247 | 15964;15965;15966 | chr2:178633425;178633424;178633423 | chr2:179498152;179498151;179498150 |
Novex-1 | 5372 | 16339;16340;16341 | chr2:178633425;178633424;178633423 | chr2:179498152;179498151;179498150 |
Novex-2 | 5439 | 16540;16541;16542 | chr2:178633425;178633424;178633423 | chr2:179498152;179498151;179498150 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs794729429 | -0.683 | None | N | 0.292 | 0.041 | 0.101711395817 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
V/I | rs794729429 | -0.683 | None | N | 0.292 | 0.041 | 0.101711395817 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93349E-04 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs794729429 | -0.683 | None | N | 0.292 | 0.041 | 0.101711395817 | gnomAD-4.0.0 | 1.11575E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.23354E-05 | None | 0 | 0 | 1.44119E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6332 | likely_pathogenic | 0.5547 | ambiguous | -2.287 | Highly Destabilizing | 0.052 | N | 0.651 | neutral | N | 0.450547923 | None | None | N |
V/C | 0.878 | likely_pathogenic | 0.8419 | pathogenic | -2.313 | Highly Destabilizing | 0.935 | D | 0.804 | deleterious | None | None | None | None | N |
V/D | 0.9832 | likely_pathogenic | 0.9797 | pathogenic | -2.962 | Highly Destabilizing | 0.741 | D | 0.853 | deleterious | D | 0.627975742 | None | None | N |
V/E | 0.9626 | likely_pathogenic | 0.9548 | pathogenic | -2.77 | Highly Destabilizing | 0.555 | D | 0.813 | deleterious | None | None | None | None | N |
V/F | 0.4406 | ambiguous | 0.3772 | ambiguous | -1.518 | Destabilizing | 0.188 | N | 0.791 | deleterious | N | 0.480797006 | None | None | N |
V/G | 0.797 | likely_pathogenic | 0.7526 | pathogenic | -2.81 | Highly Destabilizing | 0.484 | N | 0.825 | deleterious | D | 0.627975742 | None | None | N |
V/H | 0.9791 | likely_pathogenic | 0.9754 | pathogenic | -2.462 | Highly Destabilizing | 0.935 | D | 0.844 | deleterious | None | None | None | None | N |
V/I | 0.0781 | likely_benign | 0.0723 | benign | -0.833 | Destabilizing | None | N | 0.292 | neutral | N | 0.458987865 | None | None | N |
V/K | 0.9675 | likely_pathogenic | 0.9626 | pathogenic | -1.966 | Destabilizing | 0.555 | D | 0.804 | deleterious | None | None | None | None | N |
V/L | 0.1991 | likely_benign | 0.1492 | benign | -0.833 | Destabilizing | None | N | 0.331 | neutral | N | 0.349879342 | None | None | N |
V/M | 0.2658 | likely_benign | 0.2164 | benign | -1.042 | Destabilizing | 0.235 | N | 0.699 | prob.neutral | None | None | None | None | N |
V/N | 0.9444 | likely_pathogenic | 0.9319 | pathogenic | -2.302 | Highly Destabilizing | 0.791 | D | 0.848 | deleterious | None | None | None | None | N |
V/P | 0.9858 | likely_pathogenic | 0.9844 | pathogenic | -1.29 | Destabilizing | 0.791 | D | 0.832 | deleterious | None | None | None | None | N |
V/Q | 0.9552 | likely_pathogenic | 0.9455 | pathogenic | -2.203 | Highly Destabilizing | 0.791 | D | 0.821 | deleterious | None | None | None | None | N |
V/R | 0.953 | likely_pathogenic | 0.9459 | pathogenic | -1.698 | Destabilizing | 0.555 | D | 0.85 | deleterious | None | None | None | None | N |
V/S | 0.8798 | likely_pathogenic | 0.8444 | pathogenic | -2.958 | Highly Destabilizing | 0.555 | D | 0.8 | deleterious | None | None | None | None | N |
V/T | 0.7245 | likely_pathogenic | 0.6555 | pathogenic | -2.616 | Highly Destabilizing | 0.149 | N | 0.661 | neutral | None | None | None | None | N |
V/W | 0.9747 | likely_pathogenic | 0.9641 | pathogenic | -1.957 | Destabilizing | 0.935 | D | 0.846 | deleterious | None | None | None | None | N |
V/Y | 0.9094 | likely_pathogenic | 0.8808 | pathogenic | -1.625 | Destabilizing | 0.555 | D | 0.806 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.