Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14319 | 43180;43181;43182 | chr2:178633318;178633317;178633316 | chr2:179498045;179498044;179498043 |
N2AB | 12678 | 38257;38258;38259 | chr2:178633318;178633317;178633316 | chr2:179498045;179498044;179498043 |
N2A | 11751 | 35476;35477;35478 | chr2:178633318;178633317;178633316 | chr2:179498045;179498044;179498043 |
N2B | 5254 | 15985;15986;15987 | chr2:178633318;178633317;178633316 | chr2:179498045;179498044;179498043 |
Novex-1 | 5379 | 16360;16361;16362 | chr2:178633318;178633317;178633316 | chr2:179498045;179498044;179498043 |
Novex-2 | 5446 | 16561;16562;16563 | chr2:178633318;178633317;178633316 | chr2:179498045;179498044;179498043 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.976 | D | 0.524 | 0.48 | 0.763395407181 | gnomAD-4.0.0 | 1.36924E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9976E-07 | 1.16255E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9529 | likely_pathogenic | 0.9308 | pathogenic | -1.391 | Destabilizing | 0.982 | D | 0.412 | neutral | None | None | None | None | I |
I/C | 0.9726 | likely_pathogenic | 0.961 | pathogenic | -0.77 | Destabilizing | 1.0 | D | 0.448 | neutral | None | None | None | None | I |
I/D | 0.995 | likely_pathogenic | 0.9945 | pathogenic | -0.706 | Destabilizing | 0.999 | D | 0.742 | deleterious | None | None | None | None | I |
I/E | 0.98 | likely_pathogenic | 0.9786 | pathogenic | -0.737 | Destabilizing | 0.999 | D | 0.77 | deleterious | None | None | None | None | I |
I/F | 0.6987 | likely_pathogenic | 0.6216 | pathogenic | -1.106 | Destabilizing | 0.997 | D | 0.451 | neutral | None | None | None | None | I |
I/G | 0.9867 | likely_pathogenic | 0.9832 | pathogenic | -1.678 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | I |
I/H | 0.9792 | likely_pathogenic | 0.9762 | pathogenic | -0.989 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | I |
I/K | 0.9519 | likely_pathogenic | 0.9542 | pathogenic | -0.878 | Destabilizing | 0.999 | D | 0.767 | deleterious | D | 0.674286585 | None | None | I |
I/L | 0.3657 | ambiguous | 0.3321 | benign | -0.698 | Destabilizing | 0.787 | D | 0.397 | neutral | N | 0.499551229 | None | None | I |
I/M | 0.4336 | ambiguous | 0.3948 | ambiguous | -0.483 | Destabilizing | 0.997 | D | 0.401 | neutral | D | 0.634703668 | None | None | I |
I/N | 0.9384 | likely_pathogenic | 0.9307 | pathogenic | -0.592 | Destabilizing | 0.999 | D | 0.733 | deleterious | None | None | None | None | I |
I/P | 0.9424 | likely_pathogenic | 0.9213 | pathogenic | -0.896 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | I |
I/Q | 0.9591 | likely_pathogenic | 0.957 | pathogenic | -0.785 | Destabilizing | 0.999 | D | 0.686 | prob.delet. | None | None | None | None | I |
I/R | 0.9275 | likely_pathogenic | 0.9305 | pathogenic | -0.319 | Destabilizing | 0.999 | D | 0.733 | deleterious | D | 0.674286585 | None | None | I |
I/S | 0.9468 | likely_pathogenic | 0.9344 | pathogenic | -1.171 | Destabilizing | 0.997 | D | 0.654 | prob.neutral | None | None | None | None | I |
I/T | 0.9236 | likely_pathogenic | 0.8847 | pathogenic | -1.083 | Destabilizing | 0.976 | D | 0.524 | neutral | D | 0.672596082 | None | None | I |
I/V | 0.2264 | likely_benign | 0.1658 | benign | -0.896 | Destabilizing | 0.188 | N | 0.178 | neutral | N | 0.489474627 | None | None | I |
I/W | 0.9795 | likely_pathogenic | 0.976 | pathogenic | -1.16 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
I/Y | 0.9463 | likely_pathogenic | 0.9322 | pathogenic | -0.928 | Destabilizing | 0.999 | D | 0.383 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.