Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14324 | 43195;43196;43197 | chr2:178633303;178633302;178633301 | chr2:179498030;179498029;179498028 |
N2AB | 12683 | 38272;38273;38274 | chr2:178633303;178633302;178633301 | chr2:179498030;179498029;179498028 |
N2A | 11756 | 35491;35492;35493 | chr2:178633303;178633302;178633301 | chr2:179498030;179498029;179498028 |
N2B | 5259 | 16000;16001;16002 | chr2:178633303;178633302;178633301 | chr2:179498030;179498029;179498028 |
Novex-1 | 5384 | 16375;16376;16377 | chr2:178633303;178633302;178633301 | chr2:179498030;179498029;179498028 |
Novex-2 | 5451 | 16576;16577;16578 | chr2:178633303;178633302;178633301 | chr2:179498030;179498029;179498028 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | None | None | 1.0 | N | 0.801 | 0.419 | 0.360565625551 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2286 | likely_benign | 0.22 | benign | -1.048 | Destabilizing | 0.999 | D | 0.802 | deleterious | N | 0.520589675 | None | None | N |
P/C | 0.8902 | likely_pathogenic | 0.8864 | pathogenic | -0.699 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
P/D | 0.8246 | likely_pathogenic | 0.7968 | pathogenic | -0.583 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
P/E | 0.6655 | likely_pathogenic | 0.6392 | pathogenic | -0.559 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
P/F | 0.8825 | likely_pathogenic | 0.8836 | pathogenic | -0.661 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
P/G | 0.6591 | likely_pathogenic | 0.5985 | pathogenic | -1.363 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
P/H | 0.5447 | ambiguous | 0.559 | ambiguous | -0.804 | Destabilizing | 1.0 | D | 0.788 | deleterious | N | 0.466195377 | None | None | N |
P/I | 0.7673 | likely_pathogenic | 0.7753 | pathogenic | -0.291 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
P/K | 0.6723 | likely_pathogenic | 0.6507 | pathogenic | -0.85 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
P/L | 0.398 | ambiguous | 0.3901 | ambiguous | -0.291 | Destabilizing | 1.0 | D | 0.863 | deleterious | N | 0.521362072 | None | None | N |
P/M | 0.7247 | likely_pathogenic | 0.721 | pathogenic | -0.334 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
P/N | 0.7321 | likely_pathogenic | 0.7135 | pathogenic | -0.75 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
P/Q | 0.4515 | ambiguous | 0.4486 | ambiguous | -0.834 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
P/R | 0.494 | ambiguous | 0.4948 | ambiguous | -0.434 | Destabilizing | 1.0 | D | 0.859 | deleterious | N | 0.481026843 | None | None | N |
P/S | 0.4079 | ambiguous | 0.3787 | ambiguous | -1.291 | Destabilizing | 1.0 | D | 0.821 | deleterious | D | 0.542114786 | None | None | N |
P/T | 0.3667 | ambiguous | 0.366 | ambiguous | -1.15 | Destabilizing | 1.0 | D | 0.801 | deleterious | N | 0.520589675 | None | None | N |
P/V | 0.6191 | likely_pathogenic | 0.6267 | pathogenic | -0.508 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
P/W | 0.944 | likely_pathogenic | 0.9452 | pathogenic | -0.883 | Destabilizing | 1.0 | D | 0.703 | prob.delet. | None | None | None | None | N |
P/Y | 0.827 | likely_pathogenic | 0.8276 | pathogenic | -0.545 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.