Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14326 | 43201;43202;43203 | chr2:178633297;178633296;178633295 | chr2:179498024;179498023;179498022 |
N2AB | 12685 | 38278;38279;38280 | chr2:178633297;178633296;178633295 | chr2:179498024;179498023;179498022 |
N2A | 11758 | 35497;35498;35499 | chr2:178633297;178633296;178633295 | chr2:179498024;179498023;179498022 |
N2B | 5261 | 16006;16007;16008 | chr2:178633297;178633296;178633295 | chr2:179498024;179498023;179498022 |
Novex-1 | 5386 | 16381;16382;16383 | chr2:178633297;178633296;178633295 | chr2:179498024;179498023;179498022 |
Novex-2 | 5453 | 16582;16583;16584 | chr2:178633297;178633296;178633295 | chr2:179498024;179498023;179498022 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1161910175 | None | 0.95 | N | 0.73 | 0.192 | 0.279370189704 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Y/C | rs1161910175 | None | 0.95 | N | 0.73 | 0.192 | 0.279370189704 | gnomAD-4.0.0 | 2.03011E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.40999E-06 | 0 | 0 |
Y/H | None | None | 0.623 | N | 0.689 | 0.156 | 0.16115917748 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.4849 | ambiguous | 0.4279 | ambiguous | -0.535 | Destabilizing | 0.236 | N | 0.543 | neutral | None | None | None | None | N |
Y/C | 0.2008 | likely_benign | 0.1783 | benign | -0.058 | Destabilizing | 0.95 | D | 0.73 | deleterious | N | 0.467975708 | None | None | N |
Y/D | 0.3278 | likely_benign | 0.272 | benign | 0.612 | Stabilizing | 0.449 | N | 0.73 | deleterious | N | 0.412761355 | None | None | N |
Y/E | 0.5597 | ambiguous | 0.5152 | ambiguous | 0.592 | Stabilizing | 0.351 | N | 0.543 | neutral | None | None | None | None | N |
Y/F | 0.1436 | likely_benign | 0.1298 | benign | -0.291 | Destabilizing | 0.32 | N | 0.641 | neutral | N | 0.507018286 | None | None | N |
Y/G | 0.4232 | ambiguous | 0.3865 | ambiguous | -0.693 | Destabilizing | 0.519 | D | 0.579 | neutral | None | None | None | None | N |
Y/H | 0.1677 | likely_benign | 0.1464 | benign | 0.301 | Stabilizing | 0.623 | D | 0.689 | prob.delet. | N | 0.444625173 | None | None | N |
Y/I | 0.5479 | ambiguous | 0.49 | ambiguous | -0.147 | Destabilizing | 0.687 | D | 0.681 | prob.neutral | None | None | None | None | N |
Y/K | 0.4749 | ambiguous | 0.4523 | ambiguous | 0.062 | Stabilizing | 0.134 | N | 0.533 | neutral | None | None | None | None | N |
Y/L | 0.4456 | ambiguous | 0.381 | ambiguous | -0.147 | Destabilizing | 0.236 | N | 0.61 | neutral | None | None | None | None | N |
Y/M | 0.6773 | likely_pathogenic | 0.6292 | pathogenic | -0.226 | Destabilizing | 0.962 | D | 0.627 | neutral | None | None | None | None | N |
Y/N | 0.1988 | likely_benign | 0.1702 | benign | -0.265 | Destabilizing | 0.449 | N | 0.735 | deleterious | N | 0.462978878 | None | None | N |
Y/P | 0.7028 | likely_pathogenic | 0.641 | pathogenic | -0.258 | Destabilizing | 0.687 | D | 0.737 | deleterious | None | None | None | None | N |
Y/Q | 0.4189 | ambiguous | 0.3878 | ambiguous | -0.175 | Destabilizing | 0.519 | D | 0.677 | prob.neutral | None | None | None | None | N |
Y/R | 0.2701 | likely_benign | 0.2586 | benign | 0.245 | Stabilizing | 0.002 | N | 0.341 | neutral | None | None | None | None | N |
Y/S | 0.2079 | likely_benign | 0.1813 | benign | -0.578 | Destabilizing | 0.449 | N | 0.576 | neutral | N | 0.423654488 | None | None | N |
Y/T | 0.4152 | ambiguous | 0.3764 | ambiguous | -0.511 | Destabilizing | 0.519 | D | 0.665 | prob.neutral | None | None | None | None | N |
Y/V | 0.4136 | ambiguous | 0.3737 | ambiguous | -0.258 | Destabilizing | 0.519 | D | 0.636 | neutral | None | None | None | None | N |
Y/W | 0.4248 | ambiguous | 0.4167 | ambiguous | -0.474 | Destabilizing | 0.962 | D | 0.664 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.