Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14335 | 43228;43229;43230 | chr2:178633270;178633269;178633268 | chr2:179497997;179497996;179497995 |
N2AB | 12694 | 38305;38306;38307 | chr2:178633270;178633269;178633268 | chr2:179497997;179497996;179497995 |
N2A | 11767 | 35524;35525;35526 | chr2:178633270;178633269;178633268 | chr2:179497997;179497996;179497995 |
N2B | 5270 | 16033;16034;16035 | chr2:178633270;178633269;178633268 | chr2:179497997;179497996;179497995 |
Novex-1 | 5395 | 16408;16409;16410 | chr2:178633270;178633269;178633268 | chr2:179497997;179497996;179497995 |
Novex-2 | 5462 | 16609;16610;16611 | chr2:178633270;178633269;178633268 | chr2:179497997;179497996;179497995 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.995 | D | 0.687 | 0.445 | 0.296329037015 | gnomAD-4.0.0 | 3.18456E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77762E-05 | None | 0 | 0 | 2.86025E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1375 | likely_benign | 0.1355 | benign | -0.874 | Destabilizing | 0.991 | D | 0.482 | neutral | N | 0.465304022 | None | None | N |
T/C | 0.7459 | likely_pathogenic | 0.7037 | pathogenic | -0.262 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
T/D | 0.4972 | ambiguous | 0.5099 | ambiguous | -0.885 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
T/E | 0.3903 | ambiguous | 0.4315 | ambiguous | -0.848 | Destabilizing | 1.0 | D | 0.685 | prob.delet. | None | None | None | None | N |
T/F | 0.526 | ambiguous | 0.5243 | ambiguous | -0.714 | Destabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | N |
T/G | 0.5293 | ambiguous | 0.4818 | ambiguous | -1.186 | Destabilizing | 0.999 | D | 0.559 | neutral | None | None | None | None | N |
T/H | 0.4652 | ambiguous | 0.4589 | ambiguous | -1.502 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
T/I | 0.3457 | ambiguous | 0.3645 | ambiguous | -0.107 | Destabilizing | 0.995 | D | 0.687 | prob.delet. | D | 0.578275422 | None | None | N |
T/K | 0.244 | likely_benign | 0.2594 | benign | -1.04 | Destabilizing | 0.999 | D | 0.684 | prob.delet. | N | 0.445842044 | None | None | N |
T/L | 0.2399 | likely_benign | 0.232 | benign | -0.107 | Destabilizing | 0.987 | D | 0.533 | neutral | None | None | None | None | N |
T/M | 0.1244 | likely_benign | 0.1297 | benign | 0.321 | Stabilizing | 0.969 | D | 0.465 | neutral | None | None | None | None | N |
T/N | 0.2213 | likely_benign | 0.2066 | benign | -1.024 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
T/P | 0.2383 | likely_benign | 0.2149 | benign | -0.331 | Destabilizing | 1.0 | D | 0.773 | deleterious | N | 0.482208235 | None | None | N |
T/Q | 0.3513 | ambiguous | 0.3591 | ambiguous | -1.072 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
T/R | 0.2072 | likely_benign | 0.2296 | benign | -0.868 | Destabilizing | 0.999 | D | 0.773 | deleterious | N | 0.433537579 | None | None | N |
T/S | 0.214 | likely_benign | 0.1901 | benign | -1.174 | Destabilizing | 0.996 | D | 0.474 | neutral | N | 0.425338454 | None | None | N |
T/V | 0.2724 | likely_benign | 0.2706 | benign | -0.331 | Destabilizing | 0.987 | D | 0.477 | neutral | None | None | None | None | N |
T/W | 0.7878 | likely_pathogenic | 0.7775 | pathogenic | -0.778 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
T/Y | 0.4987 | ambiguous | 0.5007 | ambiguous | -0.572 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.