Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14339 | 43240;43241;43242 | chr2:178633258;178633257;178633256 | chr2:179497985;179497984;179497983 |
N2AB | 12698 | 38317;38318;38319 | chr2:178633258;178633257;178633256 | chr2:179497985;179497984;179497983 |
N2A | 11771 | 35536;35537;35538 | chr2:178633258;178633257;178633256 | chr2:179497985;179497984;179497983 |
N2B | 5274 | 16045;16046;16047 | chr2:178633258;178633257;178633256 | chr2:179497985;179497984;179497983 |
Novex-1 | 5399 | 16420;16421;16422 | chr2:178633258;178633257;178633256 | chr2:179497985;179497984;179497983 |
Novex-2 | 5466 | 16621;16622;16623 | chr2:178633258;178633257;178633256 | chr2:179497985;179497984;179497983 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1353557766 | None | 0.997 | N | 0.618 | 0.176 | 0.194818534648 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/D | rs1353557766 | None | 0.997 | N | 0.618 | 0.176 | 0.194818534648 | gnomAD-4.0.0 | 6.57393E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47063E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3072 | likely_benign | 0.2903 | benign | -0.54 | Destabilizing | 0.997 | D | 0.733 | deleterious | D | 0.615268177 | None | None | N |
E/C | 0.9437 | likely_pathogenic | 0.9374 | pathogenic | -0.41 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
E/D | 0.507 | ambiguous | 0.5085 | ambiguous | -1.259 | Destabilizing | 0.997 | D | 0.618 | neutral | N | 0.416902333 | None | None | N |
E/F | 0.9192 | likely_pathogenic | 0.9147 | pathogenic | 0.261 | Stabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
E/G | 0.4509 | ambiguous | 0.4668 | ambiguous | -0.966 | Destabilizing | 0.999 | D | 0.769 | deleterious | D | 0.57803677 | None | None | N |
E/H | 0.7299 | likely_pathogenic | 0.7306 | pathogenic | -0.075 | Destabilizing | 1.0 | D | 0.735 | deleterious | None | None | None | None | N |
E/I | 0.5866 | likely_pathogenic | 0.5431 | ambiguous | 0.635 | Stabilizing | 0.999 | D | 0.895 | deleterious | None | None | None | None | N |
E/K | 0.314 | likely_benign | 0.3206 | benign | -0.657 | Destabilizing | 0.997 | D | 0.674 | prob.neutral | D | 0.576119949 | None | None | N |
E/L | 0.7545 | likely_pathogenic | 0.7086 | pathogenic | 0.635 | Stabilizing | 0.999 | D | 0.834 | deleterious | None | None | None | None | N |
E/M | 0.6996 | likely_pathogenic | 0.6663 | pathogenic | 1.001 | Stabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
E/N | 0.6331 | likely_pathogenic | 0.617 | pathogenic | -1.264 | Destabilizing | 0.999 | D | 0.739 | deleterious | None | None | None | None | N |
E/P | 0.9743 | likely_pathogenic | 0.972 | pathogenic | 0.266 | Stabilizing | 0.999 | D | 0.81 | deleterious | None | None | None | None | N |
E/Q | 0.205 | likely_benign | 0.2045 | benign | -1.043 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | N | 0.485425041 | None | None | N |
E/R | 0.4665 | ambiguous | 0.4784 | ambiguous | -0.369 | Destabilizing | 0.999 | D | 0.746 | deleterious | None | None | None | None | N |
E/S | 0.3657 | ambiguous | 0.3555 | ambiguous | -1.592 | Destabilizing | 0.998 | D | 0.704 | prob.delet. | None | None | None | None | N |
E/T | 0.3786 | ambiguous | 0.341 | ambiguous | -1.229 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
E/V | 0.3828 | ambiguous | 0.3436 | ambiguous | 0.266 | Stabilizing | 0.999 | D | 0.823 | deleterious | D | 0.613180146 | None | None | N |
E/W | 0.9748 | likely_pathogenic | 0.9757 | pathogenic | 0.466 | Stabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
E/Y | 0.89 | likely_pathogenic | 0.8888 | pathogenic | 0.508 | Stabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.