Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14342 | 43249;43250;43251 | chr2:178633249;178633248;178633247 | chr2:179497976;179497975;179497974 |
N2AB | 12701 | 38326;38327;38328 | chr2:178633249;178633248;178633247 | chr2:179497976;179497975;179497974 |
N2A | 11774 | 35545;35546;35547 | chr2:178633249;178633248;178633247 | chr2:179497976;179497975;179497974 |
N2B | 5277 | 16054;16055;16056 | chr2:178633249;178633248;178633247 | chr2:179497976;179497975;179497974 |
Novex-1 | 5402 | 16429;16430;16431 | chr2:178633249;178633248;178633247 | chr2:179497976;179497975;179497974 |
Novex-2 | 5469 | 16630;16631;16632 | chr2:178633249;178633248;178633247 | chr2:179497976;179497975;179497974 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1055213360 | -2.405 | 0.994 | N | 0.901 | 0.44 | 0.522770035047 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
L/P | rs1055213360 | -2.405 | 0.994 | N | 0.901 | 0.44 | 0.522770035047 | gnomAD-4.0.0 | 1.09508E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.43947E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9447 | likely_pathogenic | 0.9317 | pathogenic | -2.935 | Highly Destabilizing | 0.904 | D | 0.611 | neutral | None | None | None | None | N |
L/C | 0.9495 | likely_pathogenic | 0.9512 | pathogenic | -2.424 | Highly Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
L/D | 0.9983 | likely_pathogenic | 0.998 | pathogenic | -3.608 | Highly Destabilizing | 0.995 | D | 0.901 | deleterious | None | None | None | None | N |
L/E | 0.993 | likely_pathogenic | 0.9914 | pathogenic | -3.374 | Highly Destabilizing | 0.995 | D | 0.903 | deleterious | None | None | None | None | N |
L/F | 0.8146 | likely_pathogenic | 0.7653 | pathogenic | -1.491 | Destabilizing | 0.961 | D | 0.698 | prob.delet. | N | 0.431491645 | None | None | N |
L/G | 0.9898 | likely_pathogenic | 0.9859 | pathogenic | -3.433 | Highly Destabilizing | 0.995 | D | 0.906 | deleterious | None | None | None | None | N |
L/H | 0.9893 | likely_pathogenic | 0.987 | pathogenic | -2.816 | Highly Destabilizing | 0.998 | D | 0.875 | deleterious | N | 0.491353115 | None | None | N |
L/I | 0.1101 | likely_benign | 0.1462 | benign | -1.454 | Destabilizing | 0.009 | N | 0.233 | neutral | N | 0.379184132 | None | None | N |
L/K | 0.9905 | likely_pathogenic | 0.9866 | pathogenic | -2.284 | Highly Destabilizing | 0.985 | D | 0.86 | deleterious | None | None | None | None | N |
L/M | 0.4099 | ambiguous | 0.3692 | ambiguous | -1.662 | Destabilizing | 0.971 | D | 0.691 | prob.delet. | None | None | None | None | N |
L/N | 0.9896 | likely_pathogenic | 0.9869 | pathogenic | -2.745 | Highly Destabilizing | 0.995 | D | 0.898 | deleterious | None | None | None | None | N |
L/P | 0.9933 | likely_pathogenic | 0.9914 | pathogenic | -1.938 | Destabilizing | 0.994 | D | 0.901 | deleterious | N | 0.490637047 | None | None | N |
L/Q | 0.9867 | likely_pathogenic | 0.9807 | pathogenic | -2.547 | Highly Destabilizing | 0.995 | D | 0.831 | deleterious | None | None | None | None | N |
L/R | 0.9825 | likely_pathogenic | 0.9777 | pathogenic | -1.99 | Destabilizing | 0.994 | D | 0.84 | deleterious | N | 0.490637047 | None | None | N |
L/S | 0.9888 | likely_pathogenic | 0.9865 | pathogenic | -3.312 | Highly Destabilizing | 0.985 | D | 0.836 | deleterious | None | None | None | None | N |
L/T | 0.9139 | likely_pathogenic | 0.8834 | pathogenic | -2.958 | Highly Destabilizing | 0.971 | D | 0.755 | deleterious | None | None | None | None | N |
L/V | 0.1885 | likely_benign | 0.1987 | benign | -1.938 | Destabilizing | 0.595 | D | 0.455 | neutral | N | 0.418052195 | None | None | N |
L/W | 0.9799 | likely_pathogenic | 0.9727 | pathogenic | -1.944 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
L/Y | 0.9838 | likely_pathogenic | 0.9789 | pathogenic | -1.838 | Destabilizing | 0.995 | D | 0.731 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.