Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14352 | 43279;43280;43281 | chr2:178633219;178633218;178633217 | chr2:179497946;179497945;179497944 |
N2AB | 12711 | 38356;38357;38358 | chr2:178633219;178633218;178633217 | chr2:179497946;179497945;179497944 |
N2A | 11784 | 35575;35576;35577 | chr2:178633219;178633218;178633217 | chr2:179497946;179497945;179497944 |
N2B | 5287 | 16084;16085;16086 | chr2:178633219;178633218;178633217 | chr2:179497946;179497945;179497944 |
Novex-1 | 5412 | 16459;16460;16461 | chr2:178633219;178633218;178633217 | chr2:179497946;179497945;179497944 |
Novex-2 | 5479 | 16660;16661;16662 | chr2:178633219;178633218;178633217 | chr2:179497946;179497945;179497944 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs561547028 | -1.051 | 0.931 | N | 0.633 | 0.304 | 0.0986583533028 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | I | None | 1.29299E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/Q | rs561547028 | -1.051 | 0.931 | N | 0.633 | 0.304 | 0.0986583533028 | 1000 genomes | 3.99361E-04 | None | None | None | None | I | None | 1.5E-03 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
K/Q | rs561547028 | -1.051 | 0.931 | N | 0.633 | 0.304 | 0.0986583533028 | gnomAD-4.0.0 | 2.47975E-06 | None | None | None | None | I | None | 5.33262E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6286 | likely_pathogenic | 0.5711 | pathogenic | -0.882 | Destabilizing | 0.835 | D | 0.581 | neutral | None | None | None | None | I |
K/C | 0.7839 | likely_pathogenic | 0.7638 | pathogenic | -1.196 | Destabilizing | 0.998 | D | 0.754 | deleterious | None | None | None | None | I |
K/D | 0.8602 | likely_pathogenic | 0.8331 | pathogenic | -0.788 | Destabilizing | 0.973 | D | 0.688 | prob.delet. | None | None | None | None | I |
K/E | 0.3716 | ambiguous | 0.3325 | benign | -0.641 | Destabilizing | 0.792 | D | 0.533 | neutral | N | 0.424638224 | None | None | I |
K/F | 0.6271 | likely_pathogenic | 0.595 | pathogenic | -0.578 | Destabilizing | 0.998 | D | 0.742 | deleterious | None | None | None | None | I |
K/G | 0.785 | likely_pathogenic | 0.7334 | pathogenic | -1.269 | Destabilizing | 0.835 | D | 0.673 | prob.neutral | None | None | None | None | I |
K/H | 0.3235 | likely_benign | 0.3013 | benign | -1.586 | Destabilizing | 0.998 | D | 0.649 | prob.neutral | None | None | None | None | I |
K/I | 0.2511 | likely_benign | 0.247 | benign | 0.141 | Stabilizing | 0.973 | D | 0.774 | deleterious | None | None | None | None | I |
K/L | 0.3024 | likely_benign | 0.2834 | benign | 0.141 | Stabilizing | 0.947 | D | 0.693 | prob.delet. | None | None | None | None | I |
K/M | 0.1436 | likely_benign | 0.1409 | benign | -0.003 | Destabilizing | 0.997 | D | 0.636 | neutral | N | 0.43295102 | None | None | I |
K/N | 0.5385 | ambiguous | 0.4966 | ambiguous | -0.999 | Destabilizing | 0.964 | D | 0.639 | neutral | D | 0.533617518 | None | None | I |
K/P | 0.991 | likely_pathogenic | 0.988 | pathogenic | -0.172 | Destabilizing | 0.016 | N | 0.401 | neutral | None | None | None | None | I |
K/Q | 0.1741 | likely_benign | 0.1658 | benign | -1.065 | Destabilizing | 0.931 | D | 0.633 | neutral | N | 0.425186063 | None | None | I |
K/R | 0.1047 | likely_benign | 0.0981 | benign | -0.834 | Destabilizing | 0.027 | N | 0.333 | neutral | N | 0.492361148 | None | None | I |
K/S | 0.6059 | likely_pathogenic | 0.5505 | ambiguous | -1.666 | Destabilizing | 0.835 | D | 0.599 | neutral | None | None | None | None | I |
K/T | 0.2402 | likely_benign | 0.2114 | benign | -1.3 | Destabilizing | 0.931 | D | 0.709 | prob.delet. | N | 0.431018346 | None | None | I |
K/V | 0.3125 | likely_benign | 0.2999 | benign | -0.172 | Destabilizing | 0.973 | D | 0.65 | prob.neutral | None | None | None | None | I |
K/W | 0.7348 | likely_pathogenic | 0.7138 | pathogenic | -0.462 | Destabilizing | 0.998 | D | 0.677 | prob.neutral | None | None | None | None | I |
K/Y | 0.4795 | ambiguous | 0.4568 | ambiguous | -0.111 | Destabilizing | 0.991 | D | 0.725 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.